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Record W7070834103

Regulation of site-specific liver metastasis by extracellular matrix proteins

2010· dissertation· en· W7070834103 on OpenAlexfundno aff

Bibliographic record

VenueeScholarship@McGill (McGill) · 2010
Typedissertation
Languageen
FieldMedicine
TopicCell Adhesion Molecules Research
Canadian institutionsnot available
FundersNational Cancer InstituteAcademy of FinlandMcGill University Health CentreMcGill University
KeywordsMetastasisExtracellular matrixAnoikisMelanomaMetastasis Suppressor GeneFocal adhesionLewis lung carcinomaHoming (biology)Cell adhesionCell
DOInot available

Abstract

fetched live from OpenAlex

Metastatic disease remains the main cause of death from cancer. Few therapeutic options for patients have demonstrated potential in curing metastatic disease. The molecular mechanisms underlying site-specific metastasis and the factors mediating tumor cell homing remain largely unknown. Based on a murine Lewis lung carcinoma tumour model of site-specific metastasis mediated by the expression of the insulin-like growth factor - I receptor (IGF-IR), we identified ECM components that show particular promise in regulating metastasis to a specific site. Specifically, we identified collagen IVα1 and α2 as differentially expressed in liver- and lung-colonizing cells. The overexpression of these genes caused major changes to cell structure and function including differences in cellular morphology, anchorage-independent growth, and resulted in a switch from a lung- to a liver-metastasizing phenotype. These changes were at least in part due to α2-integrin-mediated activation of focal adhesion kinase (FAK) and protection from anoikis. Collagen IV α1 suppression resulted in increased anoikis and decreased tumour cell colonization of the liver, making it an essential and sufficient gene in liver metastasis in our model. Moreover, type IV collagen overexpression resulted in major changes to ECM and ECM-degradation genes decreasing MMP-3, MMP-9, MMP-13, and collagen type III. Uveal melanoma cells with distinct metastatic phenotypes also showed major changes to these genes. Finally, by analyzing human specimens of metastatic disease, collagen IV was shown to be expressed only in metastatic and specifically hepatic metastases when compared to primary tumours and metastases to other organs. Collectively, these findings implicate collagen IV as a clinically relevant marker and potential target against site-specific metastasis to the liver.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.276
Teacher spread0.255 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2010
Admission routes1
Has abstractyes

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