Table 2 in Ray spider rush: Fast-tracking integrative taxonomy in Panama's cloud forests
Bibliographic record
Abstract
Table 2 (continued on next ten pages). List of the specimens used for the molecular phylogenetic analysis in the study, vouchers codes, DNA protocol, identification type (quantity), sex and localities. BIO=Biodiversity Intitute of Ontario; COPE=G.D. Omar Torrijos Herrera National Park; IMEDEA= Institut Mediterrani d’Estudis Avançats; PILA=La Amistad International Park; PNAC =Altos de Campana National Park; RFF=Forest Reserve Fortuna; CRBA=Centre de Recursos de Biodiversitat Animal. Numbers in parentheses=taxa quantity; Bold numbers =GMYC haplotypes (as in Fig. 2); Bold taxa=GenBank-only data. Voucher CodesBOLD Sequence ID / GenBank IDProtocolFamily / SubfamilyFast Identification (27)GMYC Cluster NumberIntegrative Identification (29)SexLocalitySCD1NDR015SPIPO354-10BIOMysmenidae (MYS, 1)Mysmena sp.1 FMLFCOPESFC1DBR021SPIPO006-10BIOAnapidae (ANA, 1)Anapis monteverdeAnapis monteverde Platnick & Shadab, 1978FRFFSFC1DAH006SPIPO778-10BIOSymphytognathidae (SYM, 1)Patu digua Forster & Platnick, 1977FRFF– / GU456915–Theridiosomatidae (THS, 246)15Coddingtonia euryopoides Miller, Griswold & Yin, 2009–– / HM030431–THS / Epeirotypinae (73)4Epeirotypus chavarria Coddington, 1986–SFC1N8H018SPIPA404-10BIOEpeirotypus sp.1 FML5Epeirotypus kwakwa sp. nov.FRFFSFC1NAR016epes1168 / PX096944CRBAEpeirotypus sp.1 FML5Epeirotypus kwakwa sp. nov.FRFFSFC1NCD018SPIPA400-10BIOEpeirotypus sp.1 FML5Epeirotypus kwakwa sp. nov.FRFFSFD1D8R010epes1120 / PX096942CRBAEpeirotypus sp.1 FML5Epeirotypus kwakwa sp. nov.MRFFSFD1DAR018epes1166 / PX096941CRBAEpeirotypus sp.1 FML5Epeirotypus kwakwa sp. nov.FRFFSFD1NBL015epes1058 / PX096940CRBAEpeirotypus sp.1 FML5Epeirotypus kwakwa sp. nov.FRFFSFD1NCD016SPIPA402-10BIOEpeirotypus sp.1 FML5Epeirotypus kwakwa sp. nov.FRFFSFU1N7H029SPIPA401-10BIOEpeirotypus sp.1 FML5Epeirotypus kwakwa sp. nov.FRFFSFU1NCD030epes1167 / PX096943CRBAEpeirotypus sp.1 FML5Epeirotypus kwakwa sp. nov.FRFFSFU2NCH029SPIPA403-10BIOEpeirotypus sp.1 FML5Epeirotypus kwakwa sp. nov.MRFFSAD1NFP007epes2176 / PX096956CRBAEpeirotypus sp.2 FML6Epeirotypus kote sp. nov.FPILASAU1NGA024epes2205 / PX096958CRBAEpeirotypus sp.2 FML6Epeirotypus kote sp. nov.MPILASAU1NGH021epes2204 / PX096957CRBAEpeirotypus sp.2 FML6Epeirotypus kote sp. nov.MPILASAU1NHA026epes2206 / PX096959CRBAEpeirotypus sp.2 FML6Epeirotypus kote sp. nov.FPILASFB1DAH019epes2183 / PX096947CRBAEpeirotypus sp.2 FML7Epeirotypus kra sp. nov.MRFFSFD1DAA016epes2184 / PX096948CRBAEpeirotypus sp.2 FML7Epeirotypus kra sp. nov.FRFFVoucher CodesBOLD Sequence ID / Protocol GenBank IDFamily / SubfamilyFast Identification (27)GMYC Cluster NumberIntegrative Identification (29)SexLocalitySFU1N8A024epes2203 / PX096949CRBAEpeirotypus sp.2 FML7Epeirotypus kra sp. nov.FRFFSFU1NAA009epes2053 / PX096945CRBAEpeirotypus sp.2 FML7Epeirotypus kra sp. nov.MRFFSFU2NBD029epes2063 / PX096946CRBAEpeirotypus sp.2 FML7Epeirotypus kra sp. nov.FRFFSFU1N7H026SPIPA391-10BIOEpeirotypus sp.3 FML7Epeirotypus kra sp. nov.FRFFSFU1N8L020epes3111 / PX096951CRBAEpeirotypus sp.3 FML7Epeirotypus kra sp. nov.MRFFSFU1NBH019SPIPA390-10BIOEpeirotypus sp.3 FML7Epeirotypus kra sp. nov.FRFFSFU1NCA029epes3208 / PX096953CRBAEpeirotypus sp.3 FML7Epeirotypus kra sp. nov.FRFFSFU2NBA026epes3209 / PX096954CRBAEpeirotypus sp.3 FML7Epeirotypus kra sp. nov.FRFFSFU2NCH031epes3207 / PX096952CRBAEpeirotypus sp.3 FML7Epeirotypus kra sp. nov.FRFFSFU2NBH025epes4070 / PX096965CRBAEpeirotypus sp.4 FML9Epeirotypus tain sp. nov.FRFFSFD1DAL018epes5062 / PX096955CRBAEpeirotypus sp.5 FML7Epeirotypus kra sp. nov.FRFFSTC1D5H013SPIPA395-10BIOEpeirotypus sp.6 FML3Epeirotypus jane sp. nov.FCOPESAC1DHH007SPIPA389-10BIOEpeirotypus sp.7 FML8Epeirotypus bule sp. nov.FPILASAU1NCL062SPIPA385-10BIOTheridiosoma sp.7 FML10Epeirotypus drune sp. nov.FPILASAC1DHH012epes7100 / PX096960CRBAEpeirotypus sp.7 FML10Epeirotypus drune sp. nov.FPILASAU1NCL035epes7240 / PX096962CRBAEpeirotypus sp.7 FML8Epeirotypus bule sp. nov.FPILASAU1NCR002SPIPA387-10BIOEpeirotypus sp.7 FML8Epeirotypus bule sp. nov.FPILASAU1NCR048epes7237 / PX096961CRBAEpeirotypus sp.7 FML10Epeirotypus drune sp. nov.FPILASAU2NCL028epes7239 / PX096964CRBAEpeirotypus sp.7 FML8Epeirotypus bule sp. nov.FPILASAU2NCL033epes7238 / PX096963CRBAEpeirotypus sp.7 FML8Epeirotypus bule sp. nov.FPILASFB1D9R032naafa191 / PX096968CRBANaatlo fauna11Naatlo fauna (Simon, 1897)FRFFSFB1DAR028naafa056 / PX096967CRBANaatlo fauna11Naatlo faunaMRFFSFB2D9R026SPIPA373-10BIONaatlo fauna11Naatlo faunaMRFFSFC1DBR019naafa118 / PX096966CRBANaatlo fauna11Naatlo faunaFRFFVoucher CodesBOLD Sequence ID / Protocol GenBank IDFamily / SubfamilyFast Identification (27)GMYC Cluster NumberIntegrative Identification (29)SexLocalitySFD1NBR033SPIPA374-10BIONaatlo fauna11Naatlo faunaFRFFSFU1N8A036SPIPA376-10BIONaatlo fauna11Naatlo faunaFRFFSFU1N8R028SPIPA375-10BIONaatlo fauna11Naatlo faunaFRFFSFU1NBR037naafa189 / PX096969CRBANaatlo fauna11Naatlo faunaMRFFSFU1NCD031SPIPA377-10BIONaatlo fauna11Naatlo faunaMRFFSFU1NCL016naafa190 / PX096970CRBANaatlo fauna11Naatlo faunaFRFFSCB1DFR042naas1187 / PX096980CRBANaatlo sp.1 FML12Naatlo chi sp. nov.MPNACSCB1DGD011naas1192 / PX096977CRBANaatlo sp.1 FML12Naatlo chi sp. nov.FPNACSCB1DIA010SPIPA371-10BIONaatlo sp.1 FML12Naatlo chi sp. nov.FPNACSCC1NER014SPIPA370-10BIONaatlo sp.1 FML12Naatlo chi sp. nov.FPNACSCC1NHD013SPIPA372-10BIONaatlo sp.1 FML12Naatlo chi sp. nov.FPNACSCC2NFH008SPIPA369-10BIONaatlo sp.1 FML12Naatlo chi sp. nov.FPNACSCU1NDH021naas1115 / PX096976CRBANaatlo sp.1 FML12Naatlo chi sp. nov.MPNACSCU1NGH027naas1272 / PX096978CRBANaatlo sp.1 FML12Naatlo chi sp. nov.MPNACSFB1D8L018SPIPA364-10BIONaatlo sp.1 FML14Naatlo chi sp. nov.FRFFSFB1D9H035naas1112 / PX096971CRBANaatlo sp.1 FML13Naatlo chi sp. nov.FRFFSFC1DAH012naas1271 / PX096972CRBANaatlo sp.1 FML13Naatlo chi sp. nov.FRFFSFU1N7R038naas1273 / PX096974CRBANaatlo sp.1 FML14Naatlo chi sp. nov.FRFFSFU1N8H023SPIPA366-10BIONaatlo sp.1 FML14Naatlo chi sp. nov.FRFFSFU1NBR036SPIPA363-10BIONaatlo sp.1 FML13Naatlo chi sp. nov.FRFFSFU1NCR036naas1269 / PX096975CRBANaatlo sp.1 FML14Naatlo chi sp. nov.FRFFSFU1NCR045SPIPA367-10BIONaatlo sp.1 FML13Naatlo chi sp. nov.FRFFSFU2NBH044naas1268 / PX096973CRBANaatlo sp.1 FML14Naatlo chi sp. nov.FRFFSFU2NCH028SPIPA365-10BIONaatlo sp.1 FML13Naatlo chi sp. nov.FRFFVoucher CodesBOLD Sequence ID / Protocol GenBank IDFamily / SubfamilyFast Identification (27)GMYC Cluster NumberIntegrative Identification (29)SexLocalitySTB1D9A009SPIPA368-10BIONaatlo sp.1 FML12Naatlo chi sp. nov.MCOPESTB1D9R019naas1270 / PX096984CRBANaatlo sp.1 FML12Naatlo chi sp. nov.MCOPESTC1D5A014naas1188 / PX096982CRBANaatlo sp.1 FML12Naatlo chi sp. nov.MCOPESTD1N7B029naas1186 / PX096981CRBANaatlo sp.1 FML12Naatlo chi sp. nov.FCOPESTD1N7H025naas1266 / PX096983CRBANaatlo sp.1 FML12Naatlo chi sp. nov.FCOPESTD1N7R022naas1267 / PX096985CRBANaatlo sp.1 FML12Naatlo chi sp. nov.FCOPESCD1NFD017naas1185 / PX096979CRBANaatlo sp.1 FML12Naatlo chi sp. nov.FPNACSFU2NBH023epes3054 / PX096950CRBAEpeirotypus sp.3 FML7Epeirotypus kra sp. nov.FRFFSCD1DFR014SPIPA119-10BIOTHS / Ogulniinae (22)Ogulnius sp.1 FML1Ogulnius zbodro sp. nov.FPNACSCD1DFR031SPIPA120-10BIOOgulnius sp.1 FML1Ogulnius zbodro sp. nov.FPNACSCD1DHR010SPIPA361-10BIOOgulnius sp.1 FML1Ogulnius zbodro sp. nov.FPNACSCD1NGR012SPIPA362-10BIOOgulnius sp.1 FML1Ogulnius zbodro sp. nov.MPNACSAC1DDB013oguoc103 / PX097010CRBAOgulnius cf obtectus2Ogulnius debonaja sp. nov.FPILASAU1NCB026oguoc196 / PX097012CRBAOgulnius cf obtectus2Ogulnius debonaja sp. nov.FPILASAU2NCL030oguoc198 / PX097013CRBAOgulnius cf obtectus2Ogulnius debonaja sp. nov.FPILASAU2NCL034oguoc194 / PX097011CRBAOgulnius cf obtectus2Ogulnius debonaja sp. nov.FPILASCD1DFH007oguoc195 / PX097019CRBAOgulnius cf obtectus1Ogulnius zbodro sp. nov.FPNACSCC1DER017ogus1119 / PX097021CRBAOgulnius sp.1 FML1Ogulnius zbodro sp. nov.MPNACSCD1DFD013SPIPA360-10BIOOgulnius sp.1 FML1Ogulnius zbodro sp. nov.FPNACSCD1DFR015ogus1110 / PX097020CRBAOgulnius sp.1 FML1Ogulnius zbodro sp. nov.FPNACSCD1NER013oguoc193 / PX097018CRBAOgulnius sp.1 FML1Ogulnius zbodro sp. nov.FPNACSAB1DDA002SPIPA356-10BIOOgulnius sp.2 FML2Ogulnius debonaja sp. nov.FPILASAB1DHL021ogus2197 / PX097015CRBAOgulnius sp.2 FML2Ogulnius debonaja sp. nov.MPILASAC1DEH003ogus2199 / PX097009CRBAOgulnius sp.2 FML2Ogulnius debonaja sp. nov.MPILASAD1NGL022ogus2200 / PX097016CRBAOgulnius sp.2 FML2Ogulnius debonaja sp. nov.MPILAVoucher CodesBOLD Sequence ID / Protocol GenBank IDFamily / SubfamilyFast Identification (27)GMYC Cluster NumberIntegrative Identification (29)SexLocalitySAD1NHB024ogus2101 / PX097014CRBAOgulnius sp.2 FML2Ogulnius debonaja sp. nov.FPILASAU1NCL037SPIPA359-10BIOOgulnius sp.2 FML2Ogulnius debonaja sp. nov.MPILASAU1NDB035ogus2102 / PX097017CRBAOgulnius sp.2 FML2Ogulnius debonaja sp. nov.MPILASAU1NDL029SPIPA355-10BIOOgulnius sp.2 FML2Ogulnius debonaja sp. nov.MPILASAU2NCA003SPIPA358-10BIOOgulnius sp.2 FML2Ogulnius debonaja sp. nov.FPILASAB1DEA003chts1248 / PX096992CRBATHS / Platoninae (22)Chthonos sp.1 FML21Chthonos dobo sp. nov.FPILASAB1DEL024SPIPA410-10BIOChthonos sp.1 FML21Chthonos dobo sp. nov.MPILASAD1NGB019chts1247 / PX096996CRBAChthonos sp.1 FML21Chthonos dobo sp. nov.MPILASAD1NGL021SPIPA411-10BIOChthonos sp.1 FML21Chthonos dobo sp. nov.FPILASAD1NHH012chts1245 / PX096995CRBAChthonos sp.1 FML21Chthonos dobo sp. nov.FPILASAU1NFB025chts1243 / PX096993CRBAChthonos sp.1 FML21Chthonos dobo sp. nov.FPILASAU1NGA027chts1246 / PX096994CRBAChthonos sp.1 FML21Chthonos dobo sp. nov.MPILASAU1NHB013SPIPA412-10BIOChthonos sp.1 FML21Chthonos dobo sp. nov.FPILASAU1NHP003SPIPA413-10BIOChthonos sp.1 FML21Chthonos dobo sp. nov.MPILASFB1DAL021chts1123 / PX096990CRBAChthonos sp.1 FML19Chthonos dobo sp. nov.MRFFSFU1N7D015chts1059 / PX096989CRBAChthonos sp.1 FML19Chthonos dobo sp. nov.FRFFSFU1N7L018SPIPA409-10BIOChthonos sp.1 FML19Chthonos dobo sp. nov.MRFFSFU1NBD019chts1242 / PX096991CRBAChthonos sp.1 FML19Chthonos dobo sp. nov.MRFFSFU2NAA035chts1241 / PX096997CRBAChthonos sp.1 FML20Chthonos dobo sp. nov.FRFFSFU2NAD028chts1244 / PX096998CRBACh
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.001 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.004 | 0.007 |
| Science and technology studies | 0.001 | 0.000 |
| Scholarly communication | 0.001 | 0.001 |
| Open science | 0.001 | 0.001 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.119 | 0.014 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".