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Record W7117158505 · doi:10.1093/jamia/ocaf223

AutoReporter: development of an artificial intelligence tool for automated assessment of research reporting guideline adherence

2025· article· en· W7117158505 on OpenAlexaff
David Chen, Patrick Li, Ealia Khoshkish, Seungmin Lee, Tony Ning, Umair Tahir, Henry C Y Wong, M. Lee, Srinivas Raman

Bibliographic record

VenueJournal of the American Medical Informatics Association · 2025
Typearticle
Languageen
FieldDecision Sciences
TopicMeta-analysis and systematic reviews
Canadian institutionsUniversity of British ColumbiaPrincess Margaret Cancer CentreBC Cancer AgencyMcMaster UniversityUniversity of Toronto
Fundersnot available
KeywordsGuidelineQuality (philosophy)Control (management)MEDLINEScalability

Abstract

fetched live from OpenAlex

OBJECTIVES: To develop AutoReporter, a large language model (LLM) system that automates evaluation of adherence to research reporting guidelines. MATERIALS AND METHODS: Eight prompt-engineering and retrieval strategies coupled with reasoning and general-purpose LLMs were benchmarked on the SPIRIT-CONSORT-TM corpus. The top-performing approach, AutoReporter, was validated on BenchReport, a novel benchmark dataset of expert-rated reporting guideline assessments from 10 systematic reviews. RESULTS: AutoReporter, a zero-shot, no-retrieval prompt coupled with the o3-mini reasoning LLM, demonstrated strong accuracy (CONSORT 90.09%; SPIRIT: 92.07%), substantial agreement with humans (CONSORT Cohen's κ = 0.70, SPIRIT Cohen's κ = 0.77), runtime (CONSORT: 617.26 s; SPIRIT: 544.51 s), and cost (CONSORT: 0.68 USD; SPIRIT: 0.65 USD). AutoReporter achieved a mean accuracy of 91.8% and substantial agreement (Cohen's κ > 0.6) with expert ratings from the BenchReport benchmark. DISCUSSION: Structured prompting alone can match or exceed fine-tuned domain models while forgoing manually annotated corpora and computationally intensive training. CONCLUSION: Large language models can feasibly automate reporting guideline adherence assessments for scalable quality control in scientific research reporting. AutoReporter is publicly accessible at https://autoreporter.streamlit.app.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.384
metaresearch head score (Gemma)0.340
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.948
Threshold uncertainty score0.666

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.3840.340
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0000.002
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0020.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.643
GPT teacher head0.643
Teacher spread0.000 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes1
Has abstractyes

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