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Record W7132896806

Telomeres and peroxisome proliferator-activated receptor gamma in the development of human breast cancer

2008· dissertation· W7132896806 on OpenAlexaff
Fariborz Rashid-Kolvear

Bibliographic record

VenueTSpace · 2008
Typedissertation
Language
FieldMedicine
TopicTelomeres, Telomerase, and Senescence
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsTelomeraseTelomereBreast cancerCancerDuctal carcinomaMalignancyTelomerase reverse transcriptaseCell cycle
DOInot available

Abstract

fetched live from OpenAlex

Breast cancer is the most common internal malignancy afflicting North American women. The development of breast cancer involves a sequential progression through defined clinical and pathological stages beginning with normal epithelium and progressing to hyperplasia, ductal carcinoma in situ (DCIS), invasive ductal carcinoma (IDC), and culminating in metastatic disease. This progression into metastatic disease is characterized by many molecular alterations, including the shortening of total telomere length. Cancer cells containing critically short telomeres activate telomerase to avoid cell death and it has been demonstrated to occur in 90% of breast carcinoma. Furthermore, telomerase activity has been shown to be modulated by ligands for peroxisome proliferator-activated receptor gamma (PPARγ). The integral role of telomeres in cancer progression has motivated extensive research into targeting telomeres for diagnosis and treatment of breast cancer. In the present study, the telomere shortening on chromosome 17q was analyzed in relation to average telomere length in normal epithelium, DCIS and IDC to determine if the shortening of specific telomeres can be used as a molecular marker for breast cancer progression. Furthermore, the effect of the PPARγ ligand troglitazone on telomerase activity and gene expression was examined in MDA-MB-231 breast cancer cells to determine if PPARγ ligands have an anti-telomerase effect. Results indicated that telomere shortening on chromosome 17q, harboring several genes involved in breast cancer development, is higher than the average shortening of all telomeres. Furthermore, troglitazone reduced telomerase activity in MDA-MB-231 cells independently of PPARγ activation. In addition, troglitazone inhibited cell proliferation and the cell cycle signaling pathway on MDA-MB-231 and MCF-7 breast cancer cell lines through different mechanisms. Results from microarray comparative genomic hybridization also indicated that the PPARγ gene is lost or deleted in 58% of clinical breast cancers. In conclusion, the high shortening of telomere on chromosome 17q suggests that telomere shortening is not a linear process and may serve as a marker for breast cancer progression. Furthermore, troglitazone demonstrated anti-telomerase and anti-proliferative activity in breast cancer cells. However, these effects vary depending on the cell type and experimental models employed. Finally, the loss of the PPARγ gene in over 50% of breast cancers indicates a potential tumor suppressor role for PPARγ in the development of breast cancer.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.033
GPT teacher head0.349
Teacher spread0.316 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes1
Has abstractyes

Explore more

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