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Record W7132906676

Causal Inference using Electronic Health Records in Primary Care

2024· dissertation· W7132906676 on OpenAlexfundno aff
Sumeet Kalia

Bibliographic record

VenueTSpace · 2024
Typedissertation
Language
FieldMathematics
TopicAdvanced Causal Inference Techniques
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of CanadaUniversity of TorontoDiabetes Action Research and Education Foundation
KeywordsCausal inferenceObservational studyInferenceMarginal structural modelRandomized controlled trialInstrumental variableEstimationCausality (physics)Health carePropensity score matching
DOInot available

Abstract

fetched live from OpenAlex

Prospective randomized experiments are conducted to evaluate the efficacy (or safety) of a treatment (or an intervention). However, clinical trials are expensive and prone to recruitment challenges especially when detecting rare adverse events. In these circumstances, large observational healthcare repositories, such as those comprised of electronic health record (EHR) data collected in routine primary care, may provide an alternative source to address such causal objectives. The overarching aim of this dissertation is to emulate randomized experiments using a causal framework with methodological considerations for treatment-confounder feedback with informative observation process and subject-specific (time-invariant) unmeasured covariates, high-dimensional propensity score estimation with surrogate covariates, and continuous-time causal inference with marked point processes. First, we applied a longitudinal causal inference framework using calibrated weights with non-overlapping time-intervals to evaluate the effectiveness of glucose-lowering medications using glycemic index of Hemoglobin A1c as the primary outcome. Second, we constructed marginal structural models estimated through calibrated weights obtained via several machine learning algorithms, amalgamated with the SuperLearner method for the estimation of diabetes care provisions. This work was then extended to an article on continuous-time causal inference using optimal weights to assess the long-term adverse effects of glucose lowering medication (e.g., sodium-glucose cotransporter 2 inhibitor) for the recurrent outcome of urinary tract infection. This dissertation follows the idea that events and processes influence each other using the hypothetical (or counterfactual) constructs with some temporal latency between the exposure and the outcome. From a pragmatic perspective, the utility of this dissertation is to describe the estimation of causal effects through specific events and processes available in primary care EHRs.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.075
metaresearch head score (Gemma)0.266
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.075
Threshold uncertainty score0.396

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0750.266
Meta-epidemiology (narrow)0.0010.002
Meta-epidemiology (broad)0.0020.003
Bibliometrics0.0030.005
Science and technology studies0.0010.003
Scholarly communication0.0040.006
Open science0.0030.003
Research integrity0.0030.004
Insufficient payload (model declined to judge)0.0060.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.098
GPT teacher head0.482
Teacher spread0.384 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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