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Epidemiological aspects of the Oropouche virus (Orthobunyavirus) in South America: A systematic review

2022· article· W7136880896 on OpenAlexaff
Rosângela Santos Pereira, Julia Facci Colangelo, Patrícia Gardênia Assis Souza, Larissa Gabriela Ferreira de Carvalho, Waleska Stephanie da Cruz Nizer, William Gustavo Lima

Bibliographic record

VenueRevista Colombiana de Ciencias Químico Farmacéuticas · 2022
Typearticle
Language
FieldMedicine
TopicViral Infections and Vectors
Canadian institutionsCarleton University
Fundersnot available
KeywordsEpidemiologyOrthobunyavirusArbovirusPublic healthEpidemiological surveillanceSerology

Abstract

fetched live from OpenAlex

Introduction: The Oropouche virus (OROV) is an arbovirus that belongs to the genus Orthobunyavirus and family Peribunyaviridae, responsible for causing Oropouche fever (OF) in humans. The clinical diagnosis of is doubtful due to the non-specificity of the symptoms, which can lead to a mistaken diagnosis of other arboviruses. Thus, the survey of epidemiological data on the occurrence of has been a major challenge for public health authorities, especially in of South America. Aim: To determine the general exposure rate of OROV in Brazil and other countries in South America by a systematic review. An article search was carried out in the Pubmed/ Medline, Scopus, Cochrane, Lilacs, Electronic Scientific Online Library (SciELO) and Virtual Health Library (VHL) databases. Results:18 studies were selected as eligible to compose this review on epidemiological aspects of OROV. The studies were published from 1989 to 2020. Most studies were carried out in Brazil (12/18; 66.66%) and Peru (5/18; 27.77%), only one study collected samples from Peru, Ecuador, Bolivia and Paraguay. The test for the OROV was realized mainly by serological analysis. Of the 8005 samples analyzed, 1570 tested positive for the presence of OROV thus accounting a general exposure rate in South America of 19.61%. Brazil was responsible for more than half of the cases of OROV identified in South America (855/1570; 54.46%), however Peru has the highest rate of exposure to the virus (23.43% of frequency in Peru vs. 16.77% of frequency in Brazil). Conclusion: OROV stands out as an important public health problem in Amazonian countries in South America.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.014
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Systematic review · Consensus signal: Systematic review
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.015
Threshold uncertainty score0.018

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.014
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0070.005
Bibliometrics0.0150.016
Science and technology studies0.0010.001
Scholarly communication0.0030.002
Open science0.0020.001
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0040.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.040
GPT teacher head0.322
Teacher spread0.281 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSystematic review
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2022
Admission routes1
Has abstractyes

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