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Reevaluation of the homology of bones of the cranial vault in tetrapod vertebrates

2015· article· en· W786688390 on OpenAlexaff
Hillary C. Maddin, Nadine Piekarski, Elizabeth M. Sefton, James Hanken

Bibliographic record

VenueThe FASEB Journal · 2015
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicPaleontology and Evolutionary Biology
Canadian institutionsCarleton University
Fundersnot available
KeywordsCranial vaultBiologyAnatomyAmnioteMesodermParietal boneEctodermCranial neural crestTetrapod (structure)Evolutionary biologySkullVertebrateNeural crestPaleontologyEmbryogenesisGeneticsEmbryonic stem cellEmbryo

Abstract

fetched live from OpenAlex

Homology assessments of bones are made using one or more criteria (e.g., topology, development, phylogeny). In tetrapods, the bones of the cranial vault appear highly conserved topologically. However, recent fate maps have revealed key differences in the embryonic origin of bones of the cranial vault in representatives of two amniote lineages. In mouse, the frontal is derived from cranial neural crest (CNC) and the parietal of mesoderm, placing the CNC-mesoderm boundary at the suture between these bones. In chicken, by contrast, this boundary is located within the frontal, which thus has a dual embryonic origin. This difference is seemingly inconsistent with the traditional assessment of homology of the avian frontal with that of mammals and other tetrapods. To elucidate this apparent conflict, we fate-mapped CNC and mesoderm using GFP-transgenic axolotls to reveal specific contributions to the cranial vault. The CNC-mesoderm boundary in axolotl is located between frontal and parietal, as in mouse, but differs from that in chicken. If, however, the avian frontal is instead regarded as a fused frontal and parietal (i.e., frontoparietal) and the parietal a postparietal, then the avian cranial vault remains topologically congruent, and becomes developmentally congruent, with that of both urodeles and mammals. This hypothesis is supported by data from the fossil record: a separate frontal, parietal and postparietal is present in all stem lineages of extant taxa, including birds. Moreover, it implies that a postparietal is/was present in non-avian archosaurs but likely fuses early in ontogeny to the parietal (or supraoccipital), as it does in many extant mammals.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0010.000
Scholarly communication0.0000.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.232
Teacher spread0.202 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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