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Record W82326727 · doi:10.1096/fasebj.20.5.a950

Disruption of the murine CTP: phosphoethanolamine cytidylyltransferase gene causes embryonic lethality

2006· article· en· W82326727 on OpenAlexaff
Morgan D. Fullerton, Lin Zhu, Dennis E. Vance, Marica Bakovic

Bibliographic record

VenueThe FASEB Journal · 2006
Typearticle
Languageen
FieldMedicine
TopicPancreatic function and diabetes
Canadian institutionsHeritage Medical Research ClinicUniversity of AlbertaUniversity of Guelph
Fundersnot available
KeywordsPhosphatidylethanolaminePhosphocholineBiologyEnzymeEthanolamineMolecular biologyPhosphatidylcholineBiochemistryPhospholipidKnockout mouseBiosynthesisGeneChemistry

Abstract

fetched live from OpenAlex

The CDP: ethanolamine (Kennedy) pathway is responsible for the de novo biosynthesis of phosphatidylethanolamine (PE) and ethanolamine plasmalogens, where diacyl‐ and alkylacylglycerol are coupled with CDP‐ethanolamine for their production respectively. We have disrupted the mouse gene encoding the rate‐limiting enzyme in this pathway, CTP: phosphoethanolamine cytidylyltransferase (Pcyt2) by replacing a 2.8kb region, including the promoter region and exons 1–3 with a Neomycin cassette. Upon inter‐crossing of Pcyt2+/‐ animals we obtained low litter sizes and unexpected Mendelian frequencies. From a total of 111 pups, 40% Pcyt2+/+ and 60% Pcyt2 +/− and no knockout pups were genotyped. Examination of embryos from E13.5 and E10.5 resulted in similar patterns of distribution, with no knockout embryos identified. This demonstrates that Pcyt2−/− mice are embryonic lethal prior to at least E10.5. Comparative mRNA analyses, immunoblotting and enzyme activity assays between Pcyt2+/− and controls have revealed a tissue specific gene dosage effect with significant differences between Pcyt2+/− and controls (30–50%). In vitro enzyme activities for PE methyltransferase, a liver specific enzyme that converts PE to phosphatidylcholine reveals slightly up‐regulated activities in Pcyt2+/− animals. Phospholipid composition and content of Pcyt2+/− liver, heart and brain show no significant differences from controls. This demonstrates the importance of the Kennedy pathway for the production of ethanolamine phospholipids.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.245
Teacher spread0.230 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2006
Admission routes1
Has abstractyes

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