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Record W891393141 · doi:10.1096/fasebj.20.4.a93-b

Regulation of the CDP‐ethanolamine (Kennedy) pathway by oxysterols

2006· article· en· W891393141 on OpenAlexaff
Lin Zhu, Marica Bakovic

Bibliographic record

VenueThe FASEB Journal · 2006
Typearticle
Languageen
FieldMedicine
TopicPancreatic function and diabetes
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsEthanolamineChemistryPhosphatidylethanolamineBiochemistryPhosphatidylserineMolecular biologyBiologyPhospholipidPhosphatidylcholine

Abstract

fetched live from OpenAlex

The CDP‐ethanolamine (Kennedy) pathway synthesizes phosphatidylethanolamine (PE) and PE plasmalogens de novo from ethanolamine and diacylglycerols or alkylacyl glycerols, respectively. The intermediate reaction in which CDP: ethanolaminephosphate cytidylyltransferase (Pcyt2) catalyzes the formation of CDP‐ethanolamine from CTP and ethanolaminephosphate is the main regulatory step in this pathway. Pulse‐chase radiolabeling experiments of the mouse embryonic cells C3H10T1/2 with 14C‐ethanolamine demonstrate that 14C‐CDP‐ethanolamine synthesis decreases 70% after 48h treatments with 25‐hydroxycholesterol. After radiolabeling with 14C‐ethanolamine and 3H‐glycerol PE synthesis decreases 2‐fold under the same conditions. The regulation is at the step catalyzed by Pcyt2. Analysis of the mouse Pcyt2 promoter demonstrates that two regions could be responsive to the oxysterol treatments. The promoter region between −475bp and ‐302 bp contains the consensus binding sites for Ap1, MyoD, cEBP transcription factors; the region located within the −252/−185 bp area contains bonding sites for Sp1.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.209
Teacher spread0.199 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2006
Admission routes1
Has abstractyes

Explore more

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