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Functional characterization of human T cells generated in vitro from hematopoietic stem cells

2008· article· en· W9467325 on OpenAlexaffabout
Génève Awong, Rade Sajic, Ross La Motte‐Mohs, Alan Cochrane, Juan Carlos Zúñiga‐Pflücker

Bibliographic record

VenueThe FASEB Journal · 2008
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmune Cell Function and Interaction
Canadian institutionsUniversity of TorontoSunnybrook Hospital
Fundersnot available
KeywordsBiologyHaematopoiesisStem cellCell biologyProgenitor cellImmune systemImmunologyT cellStromal cellCancer research

Abstract

fetched live from OpenAlex

T lymphocytes are a class of white blood cells that play a major role in the adaptive immune response. T cells are generated in the unique microenvironment of the thymus; however, the precise molecular signals enabling their differentiation are still being elucidated. Using the OP9‐DL1 stromal system we have demonstrated the generation of human T cells from umbilical cord‐blood (UCB) hematopoietic stem cells (HSCs). Here, we characterize T cell specification and commitment events induced at both the phenotypic and molecular level examined by the acquisition of T‐lineage cell surface markers and the induction of T cell associated genes, respectively. In addition, in vitro derived T cell subsets are mature and functional as they proliferate and secrete IFNγ following stimulation. Furthermore, we demonstrate the ability of in vitro ‐derived human T cell progenitors to engraft and differentiate into a mouse host thymus in vitro . Finally, HSCs transduced to express an HIV (Human Immunodeficiency virus) inhibitory construct have been generated, and will be evaluated for decreased susceptibility to infection when challenged with HIV. This system has important clinical implications as it provides the foundation for a large supply of human T lymphocyte progenitors, which could be used for the immune‐reconstitution of T cell‐depleted individuals. Research supported by the Ontario HIV Treatment Network (OHTN) and the Canadian Institutes of Health Research (CIHR)

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.208
Teacher spread0.187 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes2
Has abstractyes

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