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Record W1600195011 · doi:10.1016/j.bbmt.2015.05.019

Establishment of Definitions and Review Process for Consistent Adjudication of Cause-specific Mortality after Allogeneic Unrelated-donor Hematopoietic Cell Transplantation

2015· article· en· W1600195011 on OpenAlexaff
Theresa Hahn, Lara E. Sucheston‐Campbell, Leah Preus, Xiaochun Zhu, John A. Hansen, Paul J. Martin, Li Yan, Song Liu, Stephen R. Spellman, David Tritchler, Alyssa Clay‐Gilmour, Kenan Onel, Marcelo C. Pasquini, Philip L. McCarthy

Bibliographic record

VenueBiology of Blood and Marrow Transplantation · 2015
Typearticle
Languageen
FieldMedicine
TopicCystic Fibrosis Research Advances
Canadian institutionsUniversity of Toronto
FundersNational Cancer InstituteOffice of Naval ResearchNational Heart, Lung, and Blood InstituteU.S. Public Health ServiceOnyx PharmaceuticalsTerumo BCTMedacSwedish Orphan BiovitrumMiltenyi BiotecIncyteGenentechSeattle GeneticsChimerixMedical College of WisconsinUniversity of UtahBlue Cross and Blue Shield AssociationTarix PharmaceuticalsStemCyteUniversity of MinnesotaKiadis PharmaSigma-Tau PharmaceuticalsTherakosNational Marrow Donor ProgramSt. Baldrick's FoundationNational Institute of Allergy and Infectious DiseasesRoswell Park Cancer InstituteFred Hutchinson Cancer Research CenterHealth ResearchCelgeneOsiris TherapeuticsMerckGlaxoSmithKlineGenzymeLeukemia and Lymphoma SocietyBe The Match FoundationAllos TherapeuticsActinium PharmaceuticalsAriad PharmaceuticalsOtsuka America PharmaceuticalAmgenHistoGeneticsWellPointSanofi
KeywordsMedicineCause of deathTransplantationAdjudicationDiseaseMyelodysplastic syndromesObservational studyHematopoietic stem cell transplantationInternal medicineHematopoietic cellClinical trialIntensive care medicineStem cellHaematopoiesisBone marrow

Abstract

fetched live from OpenAlex

Clinical trials commonly use adjudication committees to refine endpoints, but observational research or genome-wide association studies rarely do. Our goals were to establish definitions of cause-specific death after unrelated-donor allogeneic hematopoietic cell transplantation (URD-HCT), to estimate discordance between reported and adjudicated cause-specific death, and to identify factors contributing to inconsistency in cause-specific death determination. A consensus panel adjudicated cause-specific death in 1484 patients who died within 1 year after HCT, derived from 3532 acute leukemia or myelodysplasia patients after URD-HCT from 2000 to 2011 reported by 151 US transplant centers to the Center for International Blood and Marrow Transplant Research. Deaths were classified as disease-related or transplant-related. The panel agreed with >99% of deaths reported by centers as disease-related and 80% reported as transplant-related. Year of transplant (cohort effect) and disease status significantly influenced agreement between the panel and centers. Sensitivity analysis of deaths < 100 days post-transplant yielded the lowest agreement between the panel and centers for myelodysplastic syndrome patients. Standard predefined criteria for adjudicating cause-specific death led to consistent application to similar clinical scenarios and clearer delineation of cause-specific death categories. Other studies of competing events such as cancer-specific versus treatment-related mortality would benefit from our results. Our detailed algorithm should result in more consistent reporting of cause-specific death by centers.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.525
metaresearch head score (Gemma)0.533
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.525
Threshold uncertainty score0.585

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.5250.533
Meta-epidemiology (narrow)0.0030.004
Meta-epidemiology (broad)0.0090.008
Bibliometrics0.0510.025
Science and technology studies0.0080.006
Scholarly communication0.0130.010
Open science0.0140.012
Research integrity0.0100.008
Insufficient payload (model declined to judge)0.0050.005

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.062
GPT teacher head0.322
Teacher spread0.260 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designTheoretical or conceptual
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations48
Published2015
Admission routes1
Has abstractyes

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