MétaCan
Menu
Back to cohort
Record W2001938126 · doi:10.1089/zeb.2011.0702

Fasted Zebrafish Mimic Genetic and Physiological Responses in Mammals: A Model for Obesity and Diabetes?

2011· article· en· W2001938126 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueZebrafish · 2011
Typearticle
Languageen
FieldMedicine
TopicPancreatic function and diabetes
Canadian institutionsOntario GenomicsUniversity of Ottawa
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsZebrafishBiologyEndocrinologyInternal medicineAMPKGlycogenGlucokinasePhosphoenolpyruvate carboxykinaseSterol regulatory element-binding proteinDanioLipogenesisProtein kinase ALipid metabolismInsulinKinaseBiochemistrySterolEnzymeGeneCholesterol

Abstract

fetched live from OpenAlex

With worldwide rates of obesity and type-II diabetes increasing, it is essential to identify and understand the mechanisms involved during nutrient absorption and fuel allocation. Recent studies demonstrate that nutrients (e.g., lipids and carbohydrates) play a major regulatory role in gene transcription of glycolytic and lipogenic enzymes in addition to hormones, including insulin and glucagon. These nutrients generally exert their effects through key cellular nutrient/energy receptors. Fasting was used to identify these nutrient/energy receptors known from mammalian studies to ascertain if zebrafish (Danio rerio) are a suitable model for the study of metabolic disorders. Zebrafish were subjected to a fasting/re-feeding regime for 3 weeks, and gene expression of sterol responsive binding protein 1 and 2 (SREBP), the mammalian target of rapamycin (mTOR), cAMP response element binding protein 3-like 3 (CREB3l3), and AMP-activated protein kinase alpha (AMPKα) was assessed. Fasted zebrafish lost ∼10% of their body mass over the 3-week experiment, with an associated depression in oxygen consumption. Increases in liver AMPKα and CREB3l3 mRNA transcript level were noted, concurrent with increases in the activities of the β-oxidation and gluconeogenic markers β-hydroxyacyl CoA dehydrogenase and phosphoenolpyruvate carboxykinase, respectively. Conversely, a depression in liver mTOR and SREBP1 and 2 expression was noted, with a decrease in pyruvate kinase and alanine aminotransferase activities and decreases in liver lipid and glycogen contents. Twenty-four hours after re-feeding, zebrafish rapidly recover, and the majority of parameters return to control values. Taken together, these data suggest adult zebrafish are an appropriate model for the further study of human metabolic disorders.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.104
Threshold uncertainty score0.573

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.065
GPT teacher head0.263
Teacher spread0.198 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it