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COMPARISON OF THREE DIFFERENT METHODS FOR THE ISOLATION OF BACTERIOCIN‐LIKE INHIBITORY SUBSTANCES FROM<i>BIFIDOBACTERIUM INFANTIS</i>BCRC 14602

2009· article· en· W2020362351 on OpenAlexfundno aff
Ahmad Cheikhyoussef, Natascha Pogori, Haiqin Chen, Jianxin Zhao, Jian Tang, Wei Chen, Hao Zhang

Bibliographic record

VenueJournal of Rapid Methods & Automation in Microbiology · 2009
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicProbiotics and Fermented Foods
Canadian institutionsnot available
FundersBeef Cattle Research CouncilNational Natural Science Foundation of China
KeywordsAdsorptionDesorptionChemistryChromatographySilicic acidSaturation (graph theory)AmmoniumYield (engineering)BacteriocinNuclear chemistryMicrobiologyBiologyOrganic chemistryMaterials science

Abstract

fetched live from OpenAlex

ABSTRACT The objective of this research was to compare three different methods for the isolation of bacteriocin‐like inhibitory substances (BLIS) from Bifidobacterium infantis BCRC 14602 (Bioresource Collection and Research Center) for their ease of use and reliability. Ammonium sulfate with 80% saturation of the neutralized cell‐free supernatant resulted in 80% of total activity and a 4.56‐fold increase in specific activity. After dialysis, the specific activity increased 76‐fold, but total activity recovered decreased to 8%. In the second method, adsorption and desorption of the BLIS onto/from the producer cells, the adsorption of the BLIS to the producer cells was strongly affected by the pH of the culture broth whereby 100% adsorption to the killed cells occurred between pH 6.0 and 7.0. Desorption of BLIS from the producer cells was achieved at pH 1.5–2.0. This procedure increased the purification fold 120 times, which was the highest among the three methods studied with a specific activity of 31,605 AU/mg and a yield of 64%. In the adsorption and desorption of BLIS onto/from silicic acid, it was confirmed that the adsorption of the BLIS to silicic acid (5%) was strongly affected by the pH of the broth culture of which 100% adsorption occurred between pH 5.0 and 7.0, whereas at pH values below 5.0 and above 7.0, the adsorption ratio decreased to 67% and 45%, respectively. The best method in terms of purification fold and yield was the adsorption and desorption of BLIS onto/from silicic acid. PRACTICAL APPLICATIONS Very low amounts of published data exist on the isolation of bacteriocins or bacteriocin‐like inhibitory substances (BLIS) from Bifidobacterium sp. To the best of our knowledge, this is the first report on a BLIS isolation from Bifidobacterium infantis BCRC 14602 (Bioresource Collection and Research Center) using different methods. The ability of the partially purified BLIS to inhibit the growth of gram‐negative bacteria, which cause food spoilage and foodborne diseases, makes the bacteriocins purified from bifidobacteria very useful in food safety applications. Further studies should focus on the isolation of the bacteriocins or BLIS of the selected bifidobacteria to evaluate their applications and roles in food preservation. The production of bacteriocins and BLIS can contribute to the elucidation of the mechanism used by bifidobacteria in host defense against potentially pathogenic bacteria dominating the gastrointestinal tract and to control the proliferation of harmful and pathogenic bacteria.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.439
Threshold uncertainty score0.281

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.358
Teacher spread0.319 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2009
Admission routes1
Has abstractyes

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