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Record W2046219227 · doi:10.1159/000101761

Community Engagement and Informed Consent in the International HapMap Project

2007· article· en· W2046219227 on OpenAlexfundno aff
Charles N. Rotimi, Mark Leppert, Ichiro Matsuda, Changqing Zeng, Houcan Zhang, Clement Adebamowo, IkeOluwapo O. Ajayi, Toyin Aniagwu, Missy Dixon, Yoshimitsu Fukushima, Darryl Macer, Patricia A. Marshall, Chibuzor Nkwodimmah, Andy Peiffer, Charmaine Royal, Eiko Suda, Hui Zhao, Vivian Ota Wang, Jean E. McEwen

Bibliographic record

VenuePublic Health Genomics · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicNutrition, Genetics, and Disease
Canadian institutionsnot available
FundersMinistry of Education, Science and TechnologyInnovation and Technology CommissionMinistry of Science and Technology of the People's Republic of ChinaUniversity Grants CommitteeWellcome TrustGenome CanadaW. M. Keck Foundation
KeywordsInternational HapMap ProjectInformed consentOpenness to experienceHuman genetic variationCommunity engagementVariation (astronomy)Public healthPublic relationsPsychologyMedicinePolitical scienceSocial psychologyAlternative medicineHaplotypeGeneticsBiologyHuman genomeNursing

Abstract

fetched live from OpenAlex

The International HapMap Consortium has developed the HapMap, a resource that describes the common patterns of human genetic variation (haplotypes). Processes of community/public consultation and individual informed consent were implemented in each locality where samples were collected to understand and attempt to address both individual and group concerns. Perceptions about the research varied, but we detected no critical opposition to the research. Incorporating community input and responding to concerns raised was challenging. However, the experience suggests that approaching genetic variation research in a spirit of openness can help investigators better appreciate the views of the communities whose samples they seek to study and help communities become more engaged in the science.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.257
metaresearch head score (Gemma)0.275
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Qualitative · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.257
Threshold uncertainty score0.917

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.2570.275
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.002
Science and technology studies0.0070.008
Scholarly communication0.0050.004
Open science0.0030.013
Research integrity0.0090.012
Insufficient payload (model declined to judge)0.0190.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.143
GPT teacher head0.364
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designQualitative
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations75
Published2007
Admission routes1
Has abstractyes

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