MétaCan
Menu
Back to cohort
Record W2126054845 · doi:10.1093/carcin/bgv035

The effect of environmental chemicals on the tumor microenvironment

2015· review· en· W2126054845 on OpenAlexaff
Stephanie C. Casey, Monica Vaccari, Fahd Al‐Mulla, Rabeah Al‐Temaimi, Amedeo Amedei, Mary Helen Barcellos‐Hoff, Dustin G. Brown, Marion Chapellier, Joseph Christopher, Colleen S. Curran, Stefano Forte, Roslida Abd Hamid, Petr Heneberg, Daniel C. Koch, P K Krishnakumar, Ezio Laconi, Véronique Maguer‐Satta, Fabio Marongiu, Lorenzo Memeo, Chiara Mondello, Jayadev Raju, Jesse Roman, Rabindra Roy, Elizabeth P. Ryan, Sandra Ryeom, Hosni Salem, A. Ivana Scovassi, Neetu Singh, Laura Soucek, Louis Vermeulen, Jonathan R. Whitfield, Jordan Woodrick, Annamaria Colacci, William H. Bisson, Dean W. Felsher

Bibliographic record

VenueCarcinogenesis · 2015
Typereview
Languageen
FieldMedicine
TopicCancer-related Molecular Pathways
Canadian institutionsHealth Canada
FundersNational Institute of Environmental Health SciencesKing Abdulaziz City for Science and TechnologyUniversità degli Studi di FirenzeMinisterstvo Zdravotnictví Ceské RepublikyKing Fahd University of Petroleum and MineralsAssociazione Italiana per la Ricerca sul CancroAgence Nationale de la RechercheNational Cancer InstituteNational Institutes of HealthFondazione CariploGrantová Agentura České RepublikyUniverzita Karlova v Praze
KeywordsTumor microenvironmentStromal cellCarcinogenesisImmune systemCancer researchCarcinogenExtracellular matrixEpigeneticsBiologyAngiogenesisEpigenomeCancerChemistryImmunologyCell biologyDNA methylationBiochemistryGenetics

Abstract

fetched live from OpenAlex

Potentially carcinogenic compounds may cause cancer through direct DNA damage or through indirect cellular or physiological effects. To study possible carcinogens, the fields of endocrinology, genetics, epigenetics, medicine, environmental health, toxicology, pharmacology and oncology must be considered. Disruptive chemicals may also contribute to multiple stages of tumor development through effects on the tumor microenvironment. In turn, the tumor microenvironment consists of a complex interaction among blood vessels that feed the tumor, the extracellular matrix that provides structural and biochemical support, signaling molecules that send messages and soluble factors such as cytokines. The tumor microenvironment also consists of many host cellular effectors including multipotent stromal cells/mesenchymal stem cells, fibroblasts, endothelial cell precursors, antigen-presenting cells, lymphocytes and innate immune cells. Carcinogens can influence the tumor microenvironment through effects on epithelial cells, the most common origin of cancer, as well as on stromal cells, extracellular matrix components and immune cells. Here, we review how environmental exposures can perturb the tumor microenvironment. We suggest a role for disrupting chemicals such as nickel chloride, Bisphenol A, butyltins, methylmercury and paraquat as well as more traditional carcinogens, such as radiation, and pharmaceuticals, such as diabetes medications, in the disruption of the tumor microenvironment. Further studies interrogating the role of chemicals and their mixtures in dose-dependent effects on the tumor microenvironment could have important general mechanistic implications for the etiology and prevention of tumorigenesis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.003
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0020.002
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.273
Teacher spread0.250 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations151
Published2015
Admission routes1
Has abstractyes

Explore more

Same venueCarcinogenesisSame topicCancer-related Molecular PathwaysFrench-language works237,207