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Record W2321350289 · doi:10.1158/1538-7445.am10-2680

Abstract 2680: Nonautoinhibitory properties of the C-terminal helix of the mitogen- and stress-activated protein kinase 1

2010· article· en· W2321350289 on OpenAlexaff
Hong-Gyum Kim, Margarita Malakhova, I. D’Angelo, Ann M. Bode, Zigang Dong

Bibliographic record

VenueCancer Research · 2010
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMelanoma and MAPK Pathways
Canadian institutionsCanadian Light Source (Canada)
Fundersnot available
KeywordsAutophosphorylationMitogen-activated protein kinase kinaseMAP2K7Cyclin-dependent kinase 9c-RafMAP kinase kinase kinaseProtein kinase ACyclin-dependent kinase 2MAPK14Protein kinase domainProtein kinase RChemistryKinaseCell biologyBiochemistryMolecular biologyBiologyMutantGene

Abstract

fetched live from OpenAlex

Abstract Mitogen- and stress-activated protein kinase 1 (MSK1) is a growth factor-stimulated serine/threonine kinase that is important in the regulation of gene transcription and proinflammatory cytokine stimulation. MSK1 is a dual kinase possessing two distinct kinase domains linked by a hydrophobic region. The C-terminal kinase domain (CTD MSK1) is an important regulatory domain activated by ERKs and p38 mitogen-activated protein kinases (MAPKs) in response to various cellular stimuli. The activity of full length MSK1 is controlled by multiple phosphorylation sites and is mediated through stimulation of the C-terminal kinase domain. We have determined the crystal structure of the isolated active CTD MSK1 (residues 414-738) in apo- form and in complex with the non-hydrolyzable ATP analogue AMP-PNP at 2.0 and 2.5 Å resolution, respectively. The structure showed that, despite overall similarity with the p90 ribosomal S6 kinase 2 (RSK2) and the MAPK-activated protein kinase 2 (MK2), the CTD MSK1 is unexpectedly not autoinhibited by the C-terminal αL-helix. The helix does not form hydrogen bonds with a substrate-binding loop and nearby helices and lacks putative “inhibitory” residues responsible for the interaction with the kinase core. CTD MSK1 undergoes active autophosphorylation in vitro as shown by luminescent assay, and mutation of two residues, H712K and F719Y, located on the αL-helix does not convert it to RSK2-like autoinhibitory state. The protein was phosphorylated at Thr581 in the T-activation loop, and a T581A mutant showed significantly impaired autokinase activity. The “full length” C-terminal domain of MSK1 (residues 414-802) possessed weaker autophosphorylation activity compared with the truncated fragment (residues 414-738), which lacks the MAPK-docking site. Overexpression of active truncated CTD MSK1 (residues 414-738) in JB6 cells resulted in neoplastic transformation in response to EGF or TPA stimulation in a manner similar to that induced by the full length MSK1. On the other hand, the “full length” CTD (residues 414-802) suppressed colony formation ex vivo. This results indicate that the extreme C-terminal tail (residues 739-802), which encloses the ERK/p38 docking site, inhibits CTD MSK1 kinase activity. Using surface plasmon resonance (SPR) binding experiments, we showed that the C-terminal end-deleted construct does not interact with ERK1 in vitro, but the “full length” CTD MSK1 binds with ERK1 in a dose-dependent manner with a KD ∼ 70 nM. Similar binding results were obtained for interaction with ERK2 and p38. The SPR data indicate that the αL-helix is not involved in the interaction with MAP kinases. The intrinsic non-autoinhibitory C-terminal αL-helix feature suggests that the CTD has a αL-helix-independent activation mechanism, and the MAPK-docking site may regulate CTD MSK1 activity. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 101st Annual Meeting of the American Association for Cancer Research; 2010 Apr 17-21; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2010;70(8 Suppl):Abstract nr 2680.

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How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.015

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0040.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.038
GPT teacher head0.306
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2010
Admission routes1
Has abstractyes

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