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Record W2549009828 · doi:10.1371/journal.pgen.1006344

The Rise of FXR1: Escaping Cellular Senescence in Head and Neck Squamous Cell Carcinoma

2016· letter· en· W2549009828 on OpenAlexafffund
Erlinda Fernández, Frédérick A. Mallette

Bibliographic record

VenuePLoS Genetics · 2016
Typeletter
Languageen
FieldMedicine
TopicTelomeres, Telomerase, and Senescence
Canadian institutionsUniversité de MontréalHôpital Maisonneuve-Rosemont
FundersNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health Research
KeywordsSenescenceBiologyTelomereCarcinogenesisCancer researchCellular senescenceDNA damageCancerCell cycleHead and neck squamous-cell carcinomaCellCell biologyCell cycle checkpointHead and neck cancerPhenotypeGeneticsDNA

Abstract

fetched live from OpenAlex

Cellular senescence is a key tumor-suppressing mechanism in response to numerous cellular threats including oxidative stress, telomere loss, and oncogene activation.It is essentially a permanent state of G1 cell cycle arrest in which cells remain viable and metabolically active.Recent studies indicate that senescence plays a pivotal role in suppression of tumorigenesis in vivo [1,2] and is frequently observed in different premalignant tumors such as lung adenomas, neurofibromas, and naevi [3,4].Aside from its critical role in preventing cancer development, the senescence program also enhances the response to cancer therapy [5].In order to become cancerous, cells must find ways to inactivate or bypass the senescence response.In fact, the viral oncoproteins E6 and E7 from human papillomavirus (HPV), which inhibit the tumor suppressors p53 and Rb, respectively, inactivate cellular senescence in response to oncogenic stress [6,7].Thus, infection with HPV, an important risk factor for subsets of head and neck squamous cell carcinoma (HNSCC), could promote tumorigenesis by inhibiting cellular senescence.However, numerous HNSCCs are HPV-independent, thus underscoring the need to identify additional genetic alterations in HNSCC.In the September 2016 issue of PLOS Genetics, Majumber et al. reported that the Fragile X-related protein 1 (FXR1), an RNA-binding protein, suppresses the senescence response in two different HPVnegative HNSCC cell lines [8].This further supports the requirement for bypassing senescence in both HPV-positive and -negative HNSCC and sheds light on the putative role of FXR1 in promoting HNSCC.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.007
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.012
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.007
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0010.002
Open science0.0010.001
Research integrity0.0120.010
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.233
Teacher spread0.211 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations8
Published2016
Admission routes2
Has abstractyes

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