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Record W2587948547 · doi:10.1093/neuonc/nox083.164

MEDU-13. CONVERGENCE OF BMI1 AND CHD7 ON ERK SIGNALLING IN MEDULLOBLASTOMA

2017· article· en· W2587948547 on OpenAlexaff
Sara Badodi, Xinyu Zhang, Adrian M. Dubuc, Michael D. Taylor, Silvia Marino

Bibliographic record

VenueNeuro-Oncology · 2017
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPluripotent Stem Cells Research
Canadian institutionsHospital for Sick Children
Fundersnot available
KeywordsBMI1MedulloblastomaBiologyCancer researchCarcinogenesisPolycomb-group proteinsNeural stem cellGene silencingStem cellCell biologyCancerGeneticsRepressorTranscription factor

Abstract

fetched live from OpenAlex

Medulloblastoma is the most common malignant paediatric brain tumour and is associated with high morbidity and mortality. Medulloblastomas are currently classified into four distinct molecular subgroups (WNT, SHH, Group 3 and Group 4) with different prognosis and responses to therapy. The Polycomb group protein BMI1 sustains self-renewal of neural stem cells and promotes proliferation of neural progenitors during development and in adult tissue homeostasis. Upregulation of BMI1 has been described in a plethora of cancers, including medulloblastoma, and it correlates with clinical stage and poor prognosis. BMI1 is overexpressed across all medulloblastoma subgroups but it is highest in Group 4 where it sustains tumour growth. Insertional mutagenesis of the T2Onc2 transposon by Sleeping Beauty transposase in glutamatergic progenitors overexpressing BMI1 leads to medulloblastoma formation, while neither Bmi1 over-expression nor T2Onc2 transposition alone drives tumorigenesis. These medulloblastomas show frequent inactivating insertions in the chromatin remodelling factor Chd7 (Chromodomain helicase DNA binding factor 7), suggesting that upregulation of BMI1 together with CHD7 loss of function can cooperate to initiate MB tumorigenesis. A BMI1High;CHD7Low molecular signature is associated with poor prognosis in human medulloblastoma and single copy loss and inactivating mutations of CHD7 are found in medulloblastoma Group 4. Silencing of CHD7 in primary patient-derived Group 4 medulloblastoma cells results in increased proliferation and upregulation of markers characteristic of undifferentiated and highly proliferative progenitors. Notably, we demonstrate that the proliferative phenotype driven by CHD7 knockdown is dependent on BMI1. Finally we show a molecular convergence on ERK signalling mediated by CHD7 and dependent on BMI1 expression. These results shed further light on the role of BMI1 and CHD7 in medulloblastoma pathogenesis and raise the possibility that pharmacological targeting of BMI1 or ERK may be particularly indicated in a subgroup of medulloblastoma with low expression level of CHD7.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.314
Teacher spread0.291 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

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