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Record W2766643051 · doi:10.1016/j.jalz.2017.06.1394

[P3–182]: PROPAGATIVE TOXIC Aβ OLIGOMER SUBCLASS IDENTIFIED AND DEFINED BY SOLVENT ORIENTATION OF THE LYSINE 28 SIDE CHAIN

2017· article· en· W2766643051 on OpenAlexaff
Judith M. Silverman, Ebrima Gibbs, Kristina Martens, Claudia Balducci, Jing Wang, Masoud Yousefi, Xubiao Peng, Catherine M. Cowan, Gianluigi Forloni, Ging‐Yuek Robin Hsiung, Steven S. Plotkin, Cheryl L. Wellington, Neil R. Cashman

Bibliographic record

VenueAlzheimer s & Dementia · 2017
Typearticle
Languageen
FieldMedicine
TopicAlzheimer's disease research and treatments
Canadian institutionsCenter for Diagnosis and Research on Alzheimer's DiseaseUniversity of British Columbia
Fundersnot available
KeywordsEpitopeMonoclonal antibodyMolecular biologyChemistryIn vivoAntibodyEpitope mappingBiochemistryBiologyImmunologyGenetics

Abstract

fetched live from OpenAlex

Oligomers of Amyloid-β (AβO) are deemed key in synaptotoxicity and amyloid seeding of Alzheimer's disease (AD). However, the heterogeneous and dynamic nature of AβO, and inadequate markers for AβO subtypes, have stymied effective AβO identification and therapeutic targeting in vivo. We identified an AβO-subclass epitope defined by constrained sidechain orientation of serine-asparagine-lysine (cSNK), not displayed by Aβ monomers and fibrils. Molecular dynamics simulations confirmed the epitope restriction of cSNK to AβOs. Specificity of a mouse monoclonal antibody raised against the AβO cSNK epitope was evaluated by surface plasmon resonance (SPR), dot blotting/immunoblotting, immunoprecipitation, immunohistochemistry and immunoelectron microscopy. The percent of AβO falling into the cSNK subclass was defined by acute peripheral infusion of anti-AβO in aged animals of two AD mouse models (Tg2576 and APP/PS1) followed by soluble Aβ aggregate quantification. Behavioural toxicity of AβO was evaluated in vivo by: 1) AβO intraventricularly co-injected with the anti-AbO antibody into C57BL/6 wild-type mice followed by Novel Object Recognition testing, and 2) Chronic cSNK peptide immunization of APP/PS1 mice starting at 3 months of age and continuing monthly until sacrifice at 12 months, with Cued and Contextual Fear Conditioning testing at 11 months. Immunobloting and immunohistochemistry identifed AβO sensitive cells and brain regions. A mouse monoclonal antibody targeting AβO recognizes ∼50–60 kDa SDS-resistant Aβ soluble assemblages in AD brain. Acute peripheral infusion of anti-AβO in AD mouse models reduced soluble brain Aβ aggregates by 20–30%. Chronic cSNK peptide immunization of APP/PS1 mice generated an anti-AβO IgG1 response without epitope spreading to Aβ monomers or fibrils, and was accompanied by preservation of global PSD95 expression and improved cued fear memory. The anti-AβO IgG1 reduced amygdalar plaque burdens in female mice, with no effect on hippocampal plaque. A parsimonious interpretation of the results is that antibody-accessible brain AβO, a minority of total AβO, participate in AD synaptic architectural disruption, with specific toxicity for post-synaptic dendrites, and seeding of Aβ fibrillogensis via the hippocampal-amygdala connectome. The IgG1 response indicates local neutralization/clearance, without the participation of Fc receptor-bearing cells. We demonstrate that pathogenic activities of AβO subclasses can be defined in vivo by immunological subtraction.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.310
Teacher spread0.280 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

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