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Record W2774891879 · doi:10.1186/s12263-017-0584-0

Proposed guidelines to evaluate scientific validity and evidence for genotype-based dietary advice

2017· review· en· W2774891879 on OpenAlexaff
Keith Grimaldi, Ben van Ommen, José M. Ordovás, Laurence D. Parnell, John C. Mathers, Igor Bendik, Lorraine Brennan, Carlos Celis‐Morales, Elisa Cirillo, Hannelore Daniel, Brenda de Kok, Ahmed El‐Sohemy, Susan J. Fairweather‐Tait, Rosalind Fallaize, Michael Fenech, Lynnette R. Ferguson, Eileen R. Gibney, Mike Gibney, Ingrid M.F. Gjelstad, Jim Kaput, Anette Karlsen, Silvia Kolossa, Julie A. Lovegrove, Anna L. Macready, Cyril F. M. Marsaux, J. Alfredo Martínéz, Fermı́n I. Milagro, Santiago Navas‐Carretero, Helen M. Roche, Wim H. M. Saris, Iwona Traczyk, Henk van Kranen, Lars Verschuren, Fabio Virgili, Peter Weber, Jildau Bouwman

Bibliographic record

VenueGenes & Nutrition · 2017
Typereview
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicNutrition, Genetics, and Disease
Canadian institutionsUniversity of Toronto
FundersNUTRIM School of Nutrition and Translational Research in MetabolismUniversiteit MaastrichtInstituto de Salud Carlos IIIUniversidad de NavarraSeventh Framework ProgrammeUniwersytet WarszawskiMaastricht Universitair Medisch CentrumUniversity College DublinEuropean CommissionWarszawski Uniwersytet MedycznyConsiglio per la ricerca in agricoltura e l’analisi dell’economia agrariaU.S. Department of Agriculture
KeywordsContext (archaeology)Scientific evidencePsychologyVariety (cybernetics)Risk analysis (engineering)MedicineComputer science

Abstract

fetched live from OpenAlex

Nutrigenetic research examines the effects of inter-individual differences in genotype on responses to nutrients and other food components, in the context of health and of nutrient requirements. A practical application of nutrigenetics is the use of personal genetic information to guide recommendations for dietary choices that are more efficacious at the individual or genetic subgroup level relative to generic dietary advice. Nutrigenetics is unregulated, with no defined standards, beyond some commercially adopted codes of practice. Only a few official nutrition-related professional bodies have embraced the subject, and, consequently, there is a lack of educational resources or guidance for implementation of the outcomes of nutrigenetic research. To avoid misuse and to protect the public, personalised nutrigenetic advice and information should be based on clear evidence of validity grounded in a careful and defensible interpretation of outcomes from nutrigenetic research studies. Evidence requirements are clearly stated and assessed within the context of state-of-the-art 'evidence-based nutrition'. We have developed and present here a draft framework that can be used to assess the strength of the evidence for scientific validity of nutrigenetic knowledge and whether 'actionable'. In addition, we propose that this framework be used as the basis for developing transparent and scientifically sound advice to the public based on nutrigenetic tests. We feel that although this area is still in its infancy, minimal guidelines are required. Though these guidelines are based on semi-quantitative data, they should stimulate debate on their utility. This framework will be revised biennially, as knowledge on the subject increases.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.519
metaresearch head score (Gemma)0.726
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: Methods
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Review · Consensus signal: none
Teacher disagreement score0.481
Threshold uncertainty score0.593

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.5190.726
Meta-epidemiology (narrow)0.0090.009
Meta-epidemiology (broad)0.0170.029
Bibliometrics0.0550.035
Science and technology studies0.0100.027
Scholarly communication0.0310.016
Open science0.0430.022
Research integrity0.0710.039
Insufficient payload (model declined to judge)0.0140.016

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.324
GPT teacher head0.460
Teacher spread0.137 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designNot applicable
DomainMethods
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations113
Published2017
Admission routes1
Has abstractyes

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