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Record W2793069598 · doi:10.1093/jcag/gwy008.290

A289 THE CROHN’S DISEASE-ASSOCIATED ADHERENT-INVASIVE E. COLIINDUCES MITOCHONDRIAL FRAGMENTATION IN ENTERIC EPITHELIUM THAT IS NOT DEPENDENT ON BACTERIAL SOLUBLE PRODUCTS OR MITOCHONDRIAL REACTIVE OXYGEN SPECIES

2018· article· en· W2793069598 on OpenAlexaffabout
Nicole L. Mancini, A Wang, Jane Shearer, Derek M. McKay

Bibliographic record

VenueJournal of the Canadian Association of Gastroenterology · 2018
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer Research and Treatments
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsMitochondrionBiologyCell biologyMitochondrial fissionmitochondrial fusionMitochondrial apoptosis-induced channelFragmentation (computing)Reactive oxygen speciesCellBacterial outer membraneInner mitochondrial membraneMitochondrial DNABiochemistry

Abstract

fetched live from OpenAlex

Despite the popular depiction, mitochondria are not distinct organelles; they exist as a dynamic network that is constantly remodelling via the balanced processes of fission and fusion to meet the energy demands of the cell and allow recycling of damaged mitochondria. Mitochondrial dysfunction has been described in IBD and pharmacologically-induced mitochondrial dysfunction leads to increased epithelial permeability. The Crohn’s disease-associated pathobiont, adherent-invasive E. coli (AIEC) can stimulate reactive oxygen species (ROS) production from epithelial cells and be apoptotic. Little is known of microbial regulation of enterocytic mitochondrial dynamics and nothing of the potential of AIEC to perturb the critical metabolic function that mitochondria fulfill for the cell. AIEC induce mitochondrial fission in intestinal epithelial cells in an invasion-dependent manner that requires ROS. Explore the relationship between mitochondrial dynamics and epithelial function in vitro and determine if, then how, infection with AIEC affects mitochondrial dynamics and any consequence for epithelial barrier function. Human colon-derived epithelial lines were cultured with AIEC or a non-invasive E. coli and the following readouts assessed: (a) visualization of mitochondria morphology and membrane potential with confocal microscopy; (b) immunoblotting of whole cell protein extracts for the mitochondrial fusion protein Optic Atrophy Factor 1 (OPA1); (c) ROS neutralized by the antioxidants; and, (e) measurement of mitochondrial fragmentation and OPA1 protein expression following treatment with spent medium from bacterial cultures. AIEC infection resulted in reduced ATP levels, reduced mitochondrial membrane potential and dramatic mitochondrial fission (fragmented mitochondria and OPA1 cleavage) in gut epithelia in a time- and dose-dependent manner. The mitochondrial fragmentation was not reproduced by exposure to AIEC conditioned medium and was not abrogated by treatment with a general (vitamin C) or a mitochondrial-specific (mitoTEMPO) anti-oxidant co-treatment. Invasion of epithelial cells by AIEC was unaffected by use of pharmacological inhibitor of mitochondria fission, P110. As a putative cause or contributor to the pathophysiology of Crohn’s disease, AIEC are shown to drive massive mitochondrial fission in epithelial cells independent of ROS generation or AIEC soluble factors. We speculate this perturbation of mitochondrial dynamics would disrupt the epithelial barrier function and lead to apoptosis which could perpetuate inflammation. CIHRUniversity of Calgary Eyes High Program

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.257
Teacher spread0.235 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes2
Has abstractyes

Explore more

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