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Record W2900003524 · doi:10.1093/neuonc/noy148.311

DRES-04. CHARACTERIZATION OF A MODEL OF TEMOZOLOMIDE RESISTANCE IN GLIOBLASTOMA

2018· article· en· W2900003524 on OpenAlexaff
Elizabeth A. Bering, Alice Yuan, J. G. Cairncross, Michael Blough

Bibliographic record

VenueNeuro-Oncology · 2018
Typearticle
Languageen
FieldMedicine
TopicGlioma Diagnosis and Treatment
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsTemozolomideMSH6MLH1MSH2Cancer researchMethyltransferaseDownregulation and upregulationDNA repairHomologous recombinationBiologyDNA mismatch repairO-6-methylguanine-DNA methyltransferaseThiostreptonGlioblastomaGeneGeneticsMethylation

Abstract

fetched live from OpenAlex

Despite the discovery and widespread use of the chemotherapeutic drug temozolomide (TMZ), glioblastoma (GBM) remains a fatal cancer. TMZ, a DNA alkylating agent, provides a moderate survival benefit to patients whose tumours do not express the O6-methylguanine-methyltransferase (MGMT) gene. However, even these TMZ-sensitive GBMs recur and upon doing so, many are resistant to TMZ. The development of TMZ resistance is commonly associated with mutations in mismatch repair (MMR) and the re-expression of MGMT. Upregulation of homologous recombination (HR) and base excision repair (BER) have also been implicated as mechanisms of acquired TMZ resistance. To better characterize these mechanisms and to develop strategies to prevent or overcome resistance, our laboratory has implemented an in vitro model of inducible resistance in which frequent exposure to TMZ (100µM) yields multiple resistant colonies in the MGMT-methylated GBM cell line U251N (Yip et. al). These colonies displayed varying methods of resistance to TMZ, including those that have been clinically observed in recurrent, TMZ-treated GBMs. Several colonies harboured mutations in MMR genes MSH6, MSH2, and MLH1 with low or absent expression of their respective proteins. In addition, some MMR wild-type colonies had increased expression of poly-ADP ribose (a polymer required for the recognition of DNA breaks by the BER machinery), suggesting that upregulation of BER may be driving resistance. Furthermore, Western Blot analysis revealed that occasional colonies re-expressed MGMT. Interestingly, a few colonies did not possess these alterations, suggesting that their resistance may result from further downstream modifications of MMR or BER, or by mutations in HR. With a more comprehensive characterization of these U251 colonies, we hope to learn more about TMZ resistance in GBM, and refine treatments or preventative therapies for molecularly distinct, TMZ-resistant, recurrent tumours.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.293
Teacher spread0.270 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes1
Has abstractyes

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