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Record W2920970793 · doi:10.1093/jcag/gwz006.041

A42 SPECIES SPECIFIC BACTERIAL LIPOPOLYSACCHARIDES INDIVIDUALLY MODULATE INTESTINAL EPITHELIAL PERMEABILITY AND INFLAMMATION THROUGH TOLL-LIKE RECEPTOR 4

2019· article· en· W2920970793 on OpenAlexaff
Matthew Stephens, Pierre‐Yves von der Weid

Bibliographic record

VenueJournal of the Canadian Association of Gastroenterology · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicInflammatory Bowel Disease
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsLipopolysaccharideTLR4CD14CytokineInflammationInflammatory bowel diseaseIntestinal permeabilityToll-like receptorMicrobiologyMolecular biologyStimulationBiologyChemistryReceptorImmunologyMedicinePathologyFlow cytometryBiochemistryInnate immune systemEndocrinology

Abstract

fetched live from OpenAlex

Patients presenting with Inflammatory bowel disease, both Crohn’s disease and ulcerative colitis, have been shown to exhibit an altered microbiome. This shift in the microbial content led us to question the importance of several of these microbes in inflammatory processes present in these diseases, and more specifically whether lipopolysaccharides from the cell wall of gram-negative bacteria differentially affect resident cell’s functions. We aimed to investigate the inflammatory contribution of five major species of gram-negative gamma-proteobacteria found to be altered in presence during IBD progression and evaluate their effect on intestinal epithelial monolayers through LPS-TLR4 activation. TLR4/MD2/CD14 co-transfected cells were seeded in 96 well plates and maintained in DMEM cell culture medium during stimulation. The cells were treated with 1ng/ml of LPS from either E.coli, K.pneumoniae, S.enterica, P.aeurginosa or S.marcescens for 24hrs at 37oC in 5% CO2. Induction of NF-κB was analysed using the QUANTIblue SEAP reporter. Permeability and stimulation assays were performed on CACO-2 human colonic epithelial carcinoma cells which were grown in either 24 well plates for cytokine analysis or to a tight monolayer on 0.4µm transwell plates. Cells were then incubated for 24hrs with or without species specific LPS and supernatants were collected for cytokine analysis or FITC-Dextran flux measured as a proxy for permeability. ZO-1 staining was also performed to classify monolayer integrity after treatment. We demonstrated that LPS from these different species had individual capacities to induce NF-κB from HEK-TLR4 cells in a TLR4 dependent manner. Additional work using human intestinal colonic epithelial cell monolayers (CACO-2) demonstrated that the cells responded to the serotype specific LPS in a distinct manner inducing TNF-α and IL-8 in significantly altered proportions. Furthermore, permeability of Caco-2 monolayers was also differentially altered by the serotype specific LPS through regulation of ZO-1. Our results suggest that specific species of bacteria may be potentiating the pathogenesis of IBD and shaping chronic inflammatory diseases through their TLR4 serotype-specific LPS responses. This may also include modulation of intestinal epithelial permeability and inflammatory response providing a potential target for microbial therapy. None

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.198
Teacher spread0.191 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

Explore more

Same venueJournal of the Canadian Association of Gastroenterology→Same topicInflammatory Bowel Disease→French-language works237,207→