MétaCan
Menu
Back to cohort

Abstract PL03-01: Targeting DNA Repair and Defective DNA repair

2019· article· en· W3000670779 on OpenAlexaff
Johann S. de Bono

Bibliographic record

VenueMolecular Cancer Therapeutics · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer Genomics and Diagnostics
Canadian institutionsInstitute of Cancer Research
Fundersnot available
KeywordsGenome instabilityDNA repairDNA damageSynthetic lethalityCancer researchCancerImmune systemBiologyMedicineDNAImmunologyGenetics

Abstract

fetched live from OpenAlex

Abstract Genomic instability and defective DNA repair (DDR) are key hallmarks of many currently incurable malignancies, with these often associating with poorer outcomes and more aggressive disease. DDR supports tumor evolution but can generate genomic alterations leading to neoantigen generation from single nucleotide alterations and genomic rearrangements/fusions, which may lead to tumor sculpting by immune responses and tumor cell adaptations to abrogate anticancer immune responses through not only immune checkpoint expression but also the secretion of cytokines and chemokines that impact immune cell migration and function. Multiple studies have now shown that DDR can be a vulnerability, both through synthetic lethal strategies with drugs like PARP and ATR inhibition and DNA damaging agents, as well as through strategies targeting the immune response as best exemplified by mismatch repair defects and PD-1 targeting and more recently emerging evidence on CDK12 alterations. This presentation will focus on the therapeutic targeting of tumors with DNA repair defects, synthetic lethal strategies, and the challenges of developing anticancer drugs targeting DNA repair. Citation Format: Johann de Bono. Targeting DNA Repair and Defective DNA repair [abstract]. In: Proceedings of the AACR-NCI-EORTC International Conference on Molecular Targets and Cancer Therapeutics; 2019 Oct 26-30; Boston, MA. Philadelphia (PA): AACR; Mol Cancer Ther 2019;18(12 Suppl):Abstract nr PL03-01. doi:10.1158/1535-7163.TARG-19-PL03-01

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.049
Threshold uncertainty score0.165

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0490.024

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.252
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

Explore more

Same venueMolecular Cancer TherapeuticsSame topicCancer Genomics and DiagnosticsFrench-language works237,207