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Record W3011033328 · doi:10.1101/2020.03.19.20031138

Adiposity, metabolites, and colorectal cancer risk: Mendelian randomization study

2020· preprint· en· W3011033328 on OpenAlexafffund
Caroline J. Bull, Joshua A. Bell, Neil Murphy, Eleanor Sanderson, George Davey Smith, Nicholas J. Timpson, Barbara L. Banbury, Demetrius Albanes, Sonja I. Berndt, Stéphane Bezieau, D. Timothy Bishop, Hermann Brenner, Daniel D. Buchanan, Andrea N. Burnett‐Hartman, Graham Casey, Sergi Castellvı́-Bel, Andrew T. Chan, Jenny Chang‐Claude, Amanda J. Cross, Albert de la Chapelle, Jane C. Figueiredo, Steven Gallinger, Sue M. Gapstur, Graham G. Giles, Stephen B. Gruber, Andrea Gsur, Jochen Hampe, Heather Hampel, Tabitha A. Harrison, Michael Hoffmeister, Li Hsu, Wen‐Yi Huang, Jeroen R. Huyghe, Mark A. Jenkins, Corinne E. Joshu, Temitope O. Keku, Tilman Kühn, Sun‐Seog Kweon, Loı̈c Le Marchand, Christopher I. Li, Li Li, Annika Lindblom, Vicente Martín, Anne M. May, Roger L. Milne, Vı́ctor Moreno, Polly A. Newcomb, Kenneth Offit, Shuji Ogino, Amanda I. Phipps, Elizabeth A. Platz, John D. Potter, Conghui Qu, J. Ramón Quirós, Gad Rennert, Elio Ríboli, Lori C. Sakoda, Clemens Schafmayer, Robert E. Schoen, Martha L. Slattery, Catherine M. Tangen, Cornelia M. Ulrich, Fränzel JB van Duijnhoven, Bethany Van Guelpen, Kala Visvanathan, Pavel Vodička, Ludmila Vodičková, Hansong Wang, Emily White, Alicja Wolk, Michael O. Woods, Anna H. Wu, Peter T. Campbell, Wei Zheng, Ulrike Peters, Emma E. Vincent, Marc J. Gunter

Bibliographic record

VenuemedRxiv · 2020
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer, Lipids, and Metabolism
Canadian institutionsMemorial University of NewfoundlandLunenfeld-Tanenbaum Research InstituteUniversity of TorontoMount Sinai Hospital
FundersMedicinska fakulteten, Umeå UniversitetInstituto de Salud Carlos IIICancer Council VictoriaOntario Ministry of Research and InnovationNational Health and Medical Research CouncilWorld Cancer Research FundMedical Research CouncilCenters for Disease Control and PreventionChonnam National University Hwasun HospitalHellenic Health FoundationJunta de Castilla y LeónXunta de GaliciaMutuelle Générale de l'Education NationaleElizabeth Blackwell Institute for Health Research, University of BristolDeutsche KrebshilfeAssociazione Italiana per la Ricerca sul CancroNordForskVetenskapsrådetNational Cancer InstituteFundación Científica Asociación Española Contra el CáncerMinisterio de Economía y CompetitividadBundesministerium für Bildung und ForschungUniversity of CambridgeZonMwCanadian Cancer Society Research InstituteInstitut National de la Santé et de la Recherche MédicaleDamon Runyon Cancer Research FoundationUniversity of BristolChonnam National UniversityCentres de Recerca de CatalunyaUmeå UniversitetMinisterstvo Zdravotnictví Ceské RepublikyGroupement des Entreprises Françaises dans la lutte contre le CancerCentre Hospitalier Universitaire de NantesEuropean CommissionCancerfondenCanadian Institutes of Health ResearchDiabetes UKGeneralitat de CatalunyaFood Standards AgencyKempe FoundationConseil Régional des Pays de la LoireMatthias Lackas-StiftungGénome QuébecKWF KankerbestrijdingWageningen University and ResearchCancer Research UKXarxa de Bancs de Tumors de CatalunyaWorld Health OrganizationMemorial Sloan-Kettering Cancer CenterWellcome TrustInstitut Gustave-RoussyGrantová Agentura České RepublikyJohns Hopkins UniversityCentre International de Recherche sur le CancerLigue Contre le CancerDeutsches KrebsforschungszentrumAgència de Gestió d'Ajuts Universitaris i de RecercaNational Institute for Health and Care ResearchDivision of Cancer Prevention, National Cancer InstituteCancer Research Foundation in Northern SwedenHarvard T.H. Chan School of Public HealthFlorida Department of HealthNational Institutes of HealthMike and Josie Harper Cancer Research InstituteUniversity of PittsburghWorld Cancer Research Fund InternationalAssociation Anne de Bretagne GenetiqueMcGill UniversityMoffitt Cancer CenterPelotoniaWereld Kanker Onderzoek FondsBrigham and Women's HospitalAmerican Cancer SocietyUniversity of South FloridaU.S. Department of Health and Human Services
KeywordsMendelian randomizationMedicineColorectal cancerBody mass indexOdds ratioInternal medicineOncologyConfidence intervalObesityCancerWaist–hip ratioWaistEndocrinologyGeneticsBiologyGenotypeGenetic variants

Abstract

fetched live from OpenAlex

Abstract Importance Evidence on adiposity altering colorectal cancer (CRC) risk differently among men and women, and on metabolic alterations mediating effects of adiposity on CRC, is unclear. Objective To examine sex- and site-specific associations of adiposity with CRC risk, and whether adiposity-associated metabolites explain associations of adiposity with CRC. Design Two-sample Mendelian randomization (MR) study. Setting Genetic variants from expanded genome-wide association studies of body mass index (BMI) and waist-to-hip ratio (WHR, unadjusted for BMI; N=806,810), and 123 metabolites (mostly lipoprotein subclass-specific lipids) from targeted nuclear magnetic resonance metabolomics (N=24,925), were used as instruments. Sex-combined and sex-specific MR was conducted for BMI and WHR with CRC risk; sex-combined MR was conducted for BMI and WHR with metabolites, for metabolites with CRC, and for BMI and WHR with CRC adjusted for metabolite classes. Participants 58,221 cases and 67,694 controls (Genetics and Epidemiology of Colorectal Cancer Consortium; Colorectal Cancer Transdisciplinary Study; Colon Cancer Family Registry). Main outcome measures Incident CRC (overall and site-specific). Results Among men, higher BMI (per 4.2 kg/m 2 ) was associated with 1.23 (95%-confidence interval (CI)=1.08, 1.38) times higher CRC odds (inverse-variance-weighted (IVW) model); among women, higher BMI (per 5.2 kg/m 2 ) was associated with 1.09 (95%-CI=0.97, 1.22) times higher CRC odds. Higher WHR was more strongly associated with CRC risk among women (IVW-OR=1.25, 95%-CI=1.08, 1.43 per 0.07-ratio) than men (IVW-OR=1.05, 95%-CI=0.81, 1.36 per 0.07-ratio). BMI or WHR was associated with 104 metabolites (false-discovery-rate-corrected P≤0.05) including low-density lipoprotein (LDL) cholesterol, but these metabolites were generally unassociated with CRC in directions consistent with mediation of adiposity-CRC relations. In multivariable MR, associations of BMI and WHR with CRC were not attenuated following adjustment for representative metabolite classes – e.g. the univariable IVW-OR of BMI for CRC was 1.12 (95%-CI=1.00, 1.26), and 1.11 (95%-CI=0.99, 1.26) adjusting for LDL lipids. Conclusions and relevance Our results suggest that higher BMI more greatly raises CRC risk among men, whereas higher WHR more greatly raises CRC risk among women. Adiposity was associated with numerous metabolic alterations, but none of these alterations explained associations between adiposity and CRC. More detailed metabolomic measures are likely needed to clarify mechanistic pathways.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.493
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.269
Teacher spread0.256 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations20
Published2020
Admission routes2
Has abstractyes

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