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Record W3033780168 · doi:10.1093/cid/ciaa718

Continuous Prophylactic Antiretrovirals/Antiretroviral Therapy Since Birth Reduces Seeding and Persistence of the Viral Reservoir in Children Vertically Infected With Human Immunodeficiency Virus

2020· letter· en· W3033780168 on OpenAlexafffund
Marta Massanella, Thanyawee Puthanakit, Louise Leyre, Thidarat Jupimai, Panadda Sawangsinth, Mark de Souza, Piyarat Suntarattiwong, Pope Kosalarksa, Thitiporn Borkird, Suparat Kanjanavanit, Kulkanya Chokephaibulkit, Rawiwan Hansudewechakul, Witaya Petdachai, Julie L. Mitchell, Merlin L. Robb, Lydie Trautmann, Jintanat Ananworanich, Nicolas Chomont, Torsak Bunupuradah, Stephen J. Kerr, Sasiwimol Ubolyam, Apicha Mahanontharit, Naphassanant Laopraynak, Preeyarach Klaytong, Tulathip Suwanlerk, Thita Pitimahajanaka, Naruporn Kasipong, Thornthan Noppakaorattanamanee, Kesdao Nanthapisal, Thatri Iampornsin, Sasithorn Burichai, Yupawadee Jummanee, Sudarat Soongpankeeree, Monta Intawan, Tuangthip Theerawat, Juthamanee Moonwong, Patchareeyawan Srimuen, Chutima Saisaengjan, Wasana Prasitsuebsai, Watsamon Jantarabenjakul, Suvaporn Anugulruengkitt, Umaporn Methanggool, Pugpen Sirikutt, Pimsiri Leowsrisook, Yosawadee Na Nakorn, Naruemon Sassungnune, Kanokkarn Wongmayurachat, Chanasda Kakkaew, Somjai Rattanamanee, Manee Yentang, Patcha Panyim, Janyarak Punyim, Thida Namwong, Siripim Kamphaengkham, Supanpilat Chaisri, Areerat Khongponoi, Ratchanee Saksawad, Usa Sukhaphan, Arena Laeyuheem, Gonzague Jourdain, Nicole Ngo‐Giang‐Huong, Sunee Sirivichayakul, Frank Maldarelli, Sarah Palmer, Michael Martin, Rangsima Lolekha, Thananda Naiwatanakul, Worawan Faikratok, Benjamas Baipluthong, Danai Teewunda, Sarawut Boonsuk, Chaweewan Tonputsa, Pariwat Tangpong, Archawin Rojanawiwat, Hansa Thaisri, Wiroi Puangtubtim, Chaidan Boonrossak, Sumet Ongwandee, Walairat Chaifoo, Cheewanan Lertpiriyasuwat, Patcharaporn Pawapootarnont, Jiraporn Chucherd, Tanawan Samleerat, Suchada Chaiwut, Suteeraporn Pinyakorn, Oratai Butterworth, Madelaine Ouellette, Nelson L. Michael, Robert Gramzinski

Bibliographic record

VenueClinical Infectious Diseases · 2020
Typeletter
Languageen
FieldImmunology and Microbiology
TopicHIV Research and Treatment
Canadian institutionsCentre Hospitalier de l’Université de Montréal
FundersNational Institute of Allergy and Infectious DiseasesFonds de Recherche du Québec - SantéAgència de Gestió d'Ajuts Universitaris i de RecercaCanadian Institutes of Health ResearchU.S. ArmyEMD SeronoUniversité de MontréalViiV HealthcareEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentU.S. Department of DefenseGilead SciencesStyrelsen för Internationellt UtvecklingssamarbeteHenry M. Jackson FoundationU.S. Department of Health and Human ServicesNational Institutes of HealthGeneralitat de Catalunya
KeywordsMedicinePersistence (discontinuity)Antiretroviral therapyVirologyHuman immunodeficiency virus (HIV)SeedingPediatricsViral loadImmunologyBiology

Abstract

fetched live from OpenAlex

BACKGROUND: Early antiretroviral therapy (ART) restricts the size of the human immunodeficiency virus (HIV) reservoir in infants. However, whether antiretroviral (ARV) prophylaxis given to exposed vertically infected children exerts similar effects remains unknown. METHODS: We measured total and integrated HIV DNA, as well as the frequency of CD4 T cells producing multiply spliced RNA (msRNA) after stimulation (inducible reservoir) in vertically infected Thai infants. Eighty-five infants were followed longitudinally for up to 3 years. We compared the size of the reservoir in children who received continuous ARV prophylaxis since birth vs those who never received or discontinued prophylaxis before initiating ART. We used samples from a cross-sectional cohort of 37 Thai children who had initiated ART within 6 months of life to validate our findings. RESULTS: Before ART, levels of HIV DNA and the frequencies of cells producing msRNA were significantly lower in infants who received continuous ARV prophylaxis since birth compared to those in whom ARV prophylaxis was discontinued or never initiated (P < .020 and P < .001, respectively). Upon ART initiation, total and integrated HIV DNA levels decayed significantly in both groups (P < .01 in all cases). Interestingly, the initial differences in the frequencies of infected cells persisted during 3 years on ART. The beneficial effect of prophylaxis on the size of the HIV reservoir was confirmed in the cross-sectional study. Importantly, no differences were observed between children who discontinued prophylactic ARVs before starting ART and those who delayed ART initiation without receiving prior prophylaxis. CONCLUSIONS: Neonatal ARV prophylaxis with direct transition to ART durably limits the size of the HIV reservoir.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.027
GPT teacher head0.292
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations21
Published2020
Admission routes2
Has abstractyes

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