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Record W3137205406 · doi:10.1186/s40635-020-00366-4

National Preclinical Sepsis Platform: developing a framework for accelerating innovation in Canadian sepsis research

2021· article· en· W3137205406 on OpenAlexafffundabout
Asher A. Mendelson, Casey Lansdell, Alison Fox‐Robichaud, Patricia C. Liaw, Jaskirat Arora, Jean‐François Cailhier, Gediminas Cepinskas, Emmanuel Charbonney, Claúdia C. dos Santos, Dhruva J. Dwivedi, Christopher G. Ellis, Dean Fergusson, Kirsten M. Fiest, Sean E. Gill, Kathryn Hendrick, Victoria Hunniford, Paulina M. Kowalewska, Karla D. Krewulak, Christine Lehmann, Kimberly F. Macala, John C. Marshall, Laura Mawdsley, Braedon McDonald, Ellen McDonald, Sarah K. Medeiros, Valdirene S. Muniz, Marcin F. Osuchowski, Justin Presseau, Neha Sharma, Sahar Sohrabipour, Janet Sunohara-Neilson, Gloria Vázquez‐Grande, Ruud A. W. Veldhuizen, Donald G. Welsh, Brent W. Winston, Ryan Zarychanski, Haibo Zhang, Juan Zhou, Manoj M. Lalu

Bibliographic record

VenueIntensive Care Medicine Experimental · 2021
Typearticle
Languageen
FieldMedicine
TopicSepsis Diagnosis and Treatment
Canadian institutionsUniversity of ManitobaUniversity of OttawaRoyal Alexandra HospitalUniversity of AlbertaUniversity Health NetworkOttawa HospitalOccupational Cancer Research CentreDalhousie UniversityWestern UniversityUniversity of TorontoUniversité de MontréalUniversity of CalgaryCentre Hospitalier de l’Université de MontréalLawson Health Research InstituteThrombosis and Atherosclerosis Research InstituteMcMaster University
FundersOttawa Hospital Anesthesia Alternate Funds AssociationCanadian Institutes of Health ResearchUniversity of Ottawa
KeywordsMedicineSepsisGeneralizability theoryTranslational researchIntensive care medicineProtocol (science)Preclinical researchBench to bedsideClinical trialClinical researchTransparency (behavior)Medical physicsAlternative medicineImmunologyPathology

Abstract

fetched live from OpenAlex

Despite decades of preclinical research, no experimentally derived therapies for sepsis have been successfully adopted into routine clinical practice. Factors that contribute to this crisis of translation include poor representation by preclinical models of the complex human condition of sepsis, bias in preclinical studies, as well as limitations of single-laboratory methodology. To overcome some of these shortcomings, multicentre preclinical studies-defined as a research experiment conducted in two or more research laboratories with a common protocol and analysis-are expected to maximize transparency, improve reproducibility, and enhance generalizability. The ultimate objective is to increase the efficiency and efficacy of bench-to-bedside translation for preclinical sepsis research and improve outcomes for patients with life-threatening infection. To this end, we organized the first meeting of the National Preclinical Sepsis Platform (NPSP). This multicentre preclinical research collaboration of Canadian sepsis researchers and stakeholders was established to study the pathophysiology of sepsis and accelerate movement of promising therapeutics into early phase clinical trials. Integrated knowledge translation and shared decision-making were emphasized to ensure the goals of the platform align with clinical researchers and patient partners. 29 participants from 10 independent labs attended and discussed four main topics: (1) objectives of the platform; (2) animal models of sepsis; (3) multicentre methodology and (4) outcomes for evaluation. A PIRO model (predisposition, insult, response, organ dysfunction) for experimental design was proposed to strengthen linkages with interdisciplinary researchers and key stakeholders. This platform represents an important resource for maximizing translational impact of preclinical sepsis research.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.019
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Qualitative · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.471
Threshold uncertainty score0.993

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.019
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.441
GPT teacher head0.538
Teacher spread0.098 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designQualitative
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations28
Published2021
Admission routes3
Has abstractyes

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