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Record W3163554303 · doi:10.1158/1055-9965.epi-20-1848

Genetically Predicted Circulating C-Reactive Protein Concentration and Colorectal Cancer Survival: A Mendelian Randomization Consortium Study

2021· article· en· W3163554303 on OpenAlexafffund
Xinwei Hua, James Y. Dai, Sara Lindström, Tabitha A. Harrison, Yi Lin, Steven R. Alberts, Elizabeth Alwers, Sonja I. Berndt, Hermann Brenner, Daniel D. Buchanan, Peter T. Campbell, Graham Casey, Jenny Chang‐Claude, Steven Gallinger, Graham G. Giles, Richard M. Goldberg, Marc J. Gunter, Michael Hoffmeister, Mark A. Jenkins, Amit D. Joshi, Wenjie Ma, Roger L. Milne, Neil Murphy, Rish K. Pai, Lori C. Sakoda, Robert E. Schoen, Qian Shi, Martha L. Slattery, Mingyang Song, Emily White, Loı̈c Le Marchand, Andrew T. Chan, Ulrike Peters, Polly A. Newcomb

Bibliographic record

VenueCancer Epidemiology Biomarkers & Prevention · 2021
Typearticle
Languageen
FieldMedicine
TopicInflammatory Biomarkers in Disease Prognosis
Canadian institutionsLunenfeld-Tanenbaum Research Institute
FundersOffice of Research Infrastructure Programs, National Institutes of HealthNational Cancer InstituteNational Human Genome Research InstituteNational Heart, Lung, and Blood InstituteNational Institute on AgingInstituto de Salud Carlos IIICenters for Disease Control and PreventionInstitut Gustave-RoussyAssociazione Italiana per la Ricerca sul CancroNordForskVetenskapsrådetCanadian Institutes of Health ResearchCancerfondenOntario Ministry of Research and InnovationDeutsches KrebsforschungszentrumLigue Contre le CancerBundesministerium für Bildung und ForschungInstitut National de la Santé et de la Recherche MédicaleDeutsche KrebshilfeUniversity of PittsburghWorld Cancer Research FundDanish Cancer Society Research CenterHealth and Medical Research FundFred Hutchinson Cancer Research CenterHellenic Health FoundationKræftens BekæmpelseAmerican Cancer SocietyJohns Hopkins UniversityCanadian Cancer SocietyCentre International de Recherche sur le CancerEuropean CommissionWorld Health OrganizationNational Institutes of HealthU.S. Department of Health and Human Services
KeywordsMendelian randomizationColorectal cancerHazard ratioOncologyMedicineProportional hazards modelInternal medicineConfoundingCancerConfidence intervalGenotypeBiologyGeneticsGenetic variants

Abstract

fetched live from OpenAlex

BACKGROUND: A positive association between circulating C-reactive protein (CRP) and colorectal cancer survival was reported in observational studies, which are susceptible to unmeasured confounding and reverse causality. We used a Mendelian randomization approach to evaluate the association between genetically predicted CRP concentrations and colorectal cancer-specific survival. METHODS: We used individual-level data for 16,918 eligible colorectal cancer cases of European ancestry from 15 studies within the International Survival Analysis of Colorectal Cancer Consortium. We calculated a genetic-risk score based on 52 CRP-associated genetic variants identified from genome-wide association studies. Because of the non-collapsibility of hazard ratios from Cox proportional hazards models, we used the additive hazards model to calculate hazard differences (HD) and 95% confidence intervals (CI) for the association between genetically predicted CRP concentrations and colorectal cancer-specific survival, overall and by stage at diagnosis and tumor location. Analyses were adjusted for age at diagnosis, sex, body mass index, genotyping platform, study, and principal components. RESULTS: = 0.16). Similarly, no associations were observed in subgroup analyses by stage at diagnosis or tumor location. CONCLUSIONS: Despite adequate power to detect moderate associations, our results did not support a causal effect of circulating CRP concentrations on colorectal cancer-specific survival. IMPACT: Future research evaluating genetically determined levels of other circulating inflammatory biomarkers (i.e., IL6) with colorectal cancer survival outcomes is needed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.021
metaresearch head score (Gemma)0.036
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.021
Threshold uncertainty score0.111

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0210.036
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.002
Science and technology studies0.0010.001
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.055
GPT teacher head0.370
Teacher spread0.315 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2021
Admission routes2
Has abstractyes

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