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Record W3199519791 · doi:10.7191/jeslib.2021.1206

Computational Reproducibility: A Practical Framework for Data Curators

2021· article· en· W3199519791 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenueJournal of eScience Librarianship · 2021
Typearticle
Languageen
FieldDecision Sciences
TopicScientific Computing and Data Management
Canadian institutionsUniversity of VictoriaMount Saint Vincent University
Fundersnot available
KeywordsReproducibilityData curationComputer scienceData scienceFocus (optics)Best practiceChemistryPolitical science

Abstract

fetched live from OpenAlex

Introduction: This paper presents concrete and actionable steps to guide researchers, data curators, and data managers in improving their understanding and practice of computational reproducibility. Objectives: Focusing on incremental progress rather than prescriptive rules, researchers and curators can build their knowledge and skills as the need arises. This paper presents a framework of incremental curation for reproducibility to support open science objectives. Methods: A computational reproducibility framework developed for the Canadian Data Curation Forum serves as the model for this approach. This framework combines learning about reproducibility with recommended steps to improving reproducibility. Conclusion: Computational reproducibility leads to more transparent and accurate research. The authors warn that fear of a crisis and focus on perfection should not prevent curation that may be ‘good enough.’

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.035
metaresearch head score (Gemma)0.200
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Scholarly communication
Consensus categoriesMetaresearch
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.353
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0350.200
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.002
Science and technology studies0.0000.000
Scholarly communication0.0020.004
Open science0.0030.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.569
GPT teacher head0.514
Teacher spread0.055 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it