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Record W3217164139

Shared Genetic Pathways Contribute to Risk of Hypertrophic and Dilated Cardiomyopathies With Opposite Directions of Effect

2020· article· en· W3217164139 on OpenAlexfundno aff
Rafik Tadros, Catherine Francis, Xiao Yan Xu, Alexa M.C. Vermeer, Andrew R. Harper, Roy Huurman, Ken Kelu Bisabu, Roddy Walsh, Benjamin Meder, Philippe Charron, Rudolf A. de Boer, Imke Christiaans, Michelle Michels, Arthur A.M. Wilde, Hugh Watkins, P.J. Matthews, James S. Ware, Connie R. Bezzina

Bibliographic record

VenueUtrecht University Repository (Utrecht University) · 2020
Typearticle
Languageen
FieldMedicine
TopicCardiomyopathy and Myosin Studies
Canadian institutionsnot available
FundersCommon FundDaiichi Sankyo EuropeNational Cancer InstituteNIH Office of the DirectorNational Institute on Drug AbuseNational Institute of Mental HealthNational Heart, Lung, and Blood InstituteServierMedical Research CouncilNational Institutes of HealthAmsterdam Cardiovascular Sciences, Amsterdam University Medical CentersHorizon 2020 Framework ProgrammeEsperion TherapeuticsMason Medical Research TrustEuropean Research Area Network on Cardiovascular DiseasesCanadian Institutes of Health ResearchIpsenFondation Institut de Cardiologie de MontréalUK Dementia Research InstituteUniversité de MontréalNetherlands Heart InstituteDeutsches Zentrum für Herz-KreislaufforschungUniversitair Medisch Centrum GroningenZonMwFondation LeducqEuropean Society of CardiologyGlaxoSmithKlineBHF Centre of Research Excellence, OxfordWellcome TrustImperial College Healthcare NHS TrustJapan Society for the Promotion of ScienceHeart Rhythm SocietyImperial College LondonNational Institute for Health and Care ResearchStichting Volksbond RotterdamAmsterdam University Medical CentersConny-Maeva Charitable FoundationNovo NordiskMyoKardiaBritish Heart FoundationPfizerUniversità degli Studi di FirenzeCytokineticsSanofiNIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer ResearchKlaus Tschira StiftungEuropean CommissionAstraZenecaAmarin CorporationBiogenInstitut de Cardiologie de MontréalHeart and Stroke Foundation of CanadaNational Human Genome Research InstituteCelgeneUK Research and InnovationBristol-Myers Squibb
KeywordsMedicineDilated cardiomyopathyHypertrophic cardiomyopathyCardiologyInternal medicineHeart failure
DOInot available

Abstract

fetched live from OpenAlex

The heart muscle diseases hypertrophic (HCM) and dilated (DCM) cardiomyopathies are leading causes of sudden death and heart failure in young, otherwise healthy, individuals. We conducted genome-wide association studies and multi-trait analyses in HCM (1,733 cases), DCM (5,521 cases) and nine left ventricular (LV) traits (19,260 UK Biobank participants with structurally normal hearts). We identified 16 loci associated with HCM, 13 with DCM and 23 with LV traits. We show strong genetic correlations between LV traits and cardiomyopathies, with opposing effects in HCM and DCM. Two-sample Mendelian randomization supports a causal association linking increased LV contractility with HCM risk. A polygenic risk score explains a significant portion of phenotypic variability in carriers of HCM-causing rare variants. Our findings thus provide evidence that polygenic risk score may account for variability in Mendelian diseases. More broadly, we provide insights into how genetic pathways may lead to distinct disorders through opposing genetic effects.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.091
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.165
Teacher spread0.157 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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