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Regulation and Function of the <i> <scp>MYC</scp> </i> Oncogene

2019· other· en· W4211194455 on OpenAlexaff
Manpreet Kalkat, Diana Resetca, Linda Z. Penn

Bibliographic record

VenueEncyclopedia of Life Sciences · 2019
Typeother
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicUbiquitin and proteasome pathways
Canadian institutionsPrincess Margaret Cancer CentreUniversity of Toronto
Fundersnot available
KeywordsBiologySUMO proteinOncogeneTranscription factorN-MycEpigeneticsEnhancerGeneCancer researchCancerCell biologyGeneticsUbiquitinCell cycleCell cultureNeuroblastoma

Abstract

fetched live from OpenAlex

Abstract One of the most acclaimed features of the MYC oncogene family ( MYC, MYCL1 and MYCN ) is their prolific deregulation in cancer, which is often associated with poor prognosis and refractory disease. Multiple mechanisms can deregulate their expression in cancer, including chromosomal translocation, enhanced messenger ribonucleic acid (mRNA) and protein stability, gene amplification or enhancer hijacking. This MYC family of nuclear transcription factors regulates the expression of a multitude of target genes to control many critically important fundamental biological processes, including cellular proliferation, metabolism, apoptosis and embryonic development. MYC proteins are highly regulated, and many factors have been reported to control stability and activity via post‐translational modifications (PTMs). Decades of research into this potent oncogene family have revealed that while directly inhibiting MYC proteins in cancer remains challenging, there are multiple strategies to indirectly inhibit MYC in cancer. Developing such inhibitors to target MYC would have profound impact on patient care and outcome. Key Concepts The MYC family of oncogenes, composed of MYC, MYCN and MYCL1 , encode nuclear basic helix‐loop‐helix transcription factors. MYC family proteins contain highly conserved regions termed MYC boxes. MYC regulates many transcriptional targets and can have wide‐reaching effects on the epigenome and total cellular RNA content. MYC is essential for cellular proliferation and is a potent oncogene when it is deregulated in cancer. Deregulated, often elevated, MYC levels have been shown to drive tumourigenesis in many in vivo models. MYC activity and stability is regulated by post‐translational modifications, including phosphorylation, ubiquitylation, SUMOylation and acetylation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.003
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.227
Teacher spread0.216 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2019
Admission routes1
Has abstractyes

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