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Record W4289794040 · doi:10.29173/jchla29617

Survey of bioinformatics courses and concentrations in ALA-accredited master’s programs

2022· article· en· W4289794040 on OpenAlexaffvenue
Leah Graham, Melissa Moleirinho

Bibliographic record

VenueJournal of the Canadian Health Libraries Association / Journal de l Association de bilbiothèques de la santé du Canada · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetics, Bioinformatics, and Biomedical Research
Canadian institutionsMcGill UniversityMcGill University Health Centre
FundersTexas Woman's University
KeywordsAccreditationComputer scienceMedical educationBioinformaticsData scienceEngineeringMedicineBiology

Abstract

fetched live from OpenAlex

Introduction: The interdisciplinary field of bioinformatics is considered an information-based discipline by many. Yet, it is unclear how Master of Library and Information Science (MLIS) degrees prepare librarians to apply their expertise in this unique, often non-textual information environment. The goal of this study is to identify the availability of MLIS-based bioinformatics educational opportunities to provide an update to the current bioinformatics landscape in North American MLIS programs or iSchools. Methods: We conducted a survey of available bioinformatics courses and program concentrations within 69 ALA-accredited master's programs. Using course catalogues and program descriptions on department websites, we identified the existence of courses and concentrations specific or related to the field of bioinformatics. We also surveyed the availability of associated certificate programs or degree alternatives. Results: Only two library and information science (LIS)-based bioinformatics courses are currently offered to MLIS students in ALA-accredited programs. There are no bioinformatics concentrations offered in the programs surveyed, however two graduate certificates could be applied towards an ALA-accredited master's degree. Students interested in related fields can pursue degree alternatives, including eight dual degree options. Discussion: The scarcity of LIS-based bioinformatics courses and program concentrations may suggest that LIS has not adopted bioinformatics into their field nor curricula. As a result, students interested in pursuing careers in bioinformatics and related disciplines must actively seek out opportunities for education and professional development. Bioinformatics degree options within MLIS or iSchools points towards an increased dialogue and acceptance of the connection between bioinformatics and information science, but the lack of ALA -accreditation limits possibilities for emerging librarians.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.005
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.409
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0070.005
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.261
Teacher spread0.248 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2022
Admission routes2
Has abstractyes

Explore more

Same venueJournal of the Canadian Health Libraries Association / Journal de l Association de bilbiothèques de la santé du CanadaSame topicGenetics, Bioinformatics, and Biomedical ResearchFrench-language works237,207