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Record W4298292496 · doi:10.17615/g4yz-mf90

A checklist for clinical trials in rare disease: obstacles and anticipatory actions—lessons learned from the FOR-DMD trial

2019· article· en· W4298292496 on OpenAlexfundaboutno aff
W. Bryan Burnette, Emma Ciafaloni, Kate Bushby, Helen Roper, P. Morehart, Ekkehard Wilichowski, Tiziana Mongini, Stefan Spinty, Barbara E. Herr, James F. Howard, Richard S. Finkel, Perry B. Shieh, Maja von der Hagen, Iain Horrocks, Hanns Lochmüller, Mathula Thangarajh, Rabi Tawil, Ulrike Schara, Kevin M. Flanigan, Elena Pegoraro, Volker Straub, William B. Martens, Hugh J. McMillan, Janbernd Kirschner, Jennifer Wilkinson, Imelda Hughes, Wendy King, Jean K. Mah, Michela Guglieri, Robert C. Griggs, L. V. Morrison, Adnan Y. Manzur, Deborah Hirtz, Rebecca A Crow, Russell J. Butterfield, Craig Campbell, Matthew Wicklund, Mary W. Brown, Craig M. McDonald, Richard J. Barohn, Basil T. Darras, Michael McDermott, Nancy L. Kuntz, Lucía Morandi, M. Eagle, Elaine McColl, Anne‐Marie Childs, Giuseppe Vita

Bibliographic record

VenueUNC Libraries · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomics and Rare Diseases
Canadian institutionsnot available
FundersMuscular Dystrophy CanadaNational Institutes of HealthMedical Research CouncilAction DuchenneParent Project Muscular DystrophyMuscular Dystrophy Association
KeywordsChecklistClinical trialPsychologyPhysical medicine and rehabilitationMedicinePhysical therapyCognitive psychologyInternal medicine

Abstract

fetched live from OpenAlex

Abstract Background Trials in rare diseases have many challenges, among which are the need to set up multiple sites in different countries to achieve recruitment targets and the divergent landscape of clinical trial regulations in those countries. Over the past years, there have been initiatives to facilitate the process of international study set-up, but the fruits of these deliberations require time to be operationally in place. FOR-DMD (Finding the Optimum Steroid Regimen for Duchenne Muscular Dystrophy) is an academic-led clinical trial which aims to find the optimum steroid regimen for Duchenne muscular dystrophy, funded by the National Institutes of Health (NIH) for 5 years (July 2010 to June 2015), anticipating that all sites (40 across the USA, Canada, the UK, Germany and Italy) would be open to recruitment from July 2011. However, study start-up was significantly delayed and recruitment did not start until January 2013. Method The FOR-DMD study is used as an example to identify systematic problems in the set-up of international, multi-centre clinical trials. The full timeline of the FOR-DMD study, from funding approval to site activation, was collated and reviewed. Systematic issues were identified and grouped into (1) study set-up, e.g. drug procurement; (2) country set-up, e.g. competent authority applications; and (3) site set-up, e.g. contracts, to identify the main causes of delay and suggest areas where anticipatory action could overcome these obstacles in future studies. Results Time from the first contact to site activation across countries ranged from 6 to 24 months. Reasons of delay were universal (sponsor agreement, drug procurement, budgetary constraints), country specific (complexity and diversity of regulatory processes, indemnity requirements) and site specific (contracting and approvals). The main identified obstacles included (1) issues related to drug supply, (2) NIH requirements regarding contracting with non-US sites, (3) differing regulatory requirements in the five participating countries, (4) lack of national harmonisation with contracting and the requirement to negotiate terms and contract individually with each site and (5) diversity of languages needed for study materials. Additionally, as with many academic-led studies, the FOR-DMD study did not have access to the infrastructure and expertise that a contracted research organisation could provide, organisations often employed in pharmaceutical-sponsored studies. This delay impacted recruitment, challenged the clinical relevance of the study outcomes and potentially delayed the delivery of the best treatment to patients. Conclusion Based on the FOR-DMD experience, and as an interim solution, we have devised a checklist of steps to not only anticipate and minimise delays in academic international trial initiation but also identify obstacles that will require a concerted effort on the part of many stakeholders to mitigate.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.722
metaresearch head score (Gemma)0.810
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: Methods
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.278
Threshold uncertainty score0.342

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.7220.810
Meta-epidemiology (narrow)0.0030.004
Meta-epidemiology (broad)0.0050.006
Bibliometrics0.0130.012
Science and technology studies0.0090.012
Scholarly communication0.0330.026
Open science0.0160.017
Research integrity0.0220.038
Insufficient payload (model declined to judge)0.0060.005

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.269
GPT teacher head0.435
Teacher spread0.166 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designNot applicable
DomainMethods
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2019
Admission routes2
Has abstractyes

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