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Record W4312087553 · doi:10.1002/alz.063883

Macropinocytosis of APP is controlled by a cascade of regulatory proteins

2022· article· en· W4312087553 on OpenAlexaff
Jordan M Krupa, Adrianna R Tsang, Claudia Seah, Stephen Pasternak

Bibliographic record

VenueAlzheimer s & Dementia · 2022
Typearticle
Languageen
FieldMedicine
TopicAlzheimer's disease research and treatments
Canadian institutionsParkwood InstituteRobarts Clinical TrialsWestern University
Fundersnot available
KeywordsPinocytosisRHOAMembrane rufflingCell biologyInternalizationRAC1CDC42EndosomeConfocal microscopyConfocalCell membraneLive cell imagingChemistrySmall GTPaseBiologyCellEndocytosisIntracellularGTPaseBiochemistrySignal transductionCytoskeleton

Abstract

fetched live from OpenAlex

Abstract Background The internalization of the Amyloid Precursor Protein (APP) is recognized as an important step in beta‐amyloid (Aβ) production. We have discovered that macropinocytosis of cell surface APP leads to rapid transport directly to lysosomes, bypassing early and late endosomes. This process leads to APP cleavage to Aβ and is regulated in part by Arf6. Here, we hypothesize that the binding/cross‐linking of APP at the cell surface recruits Fe65 and results in the recruitment and activation of Arf6. Arf6 then activates downstream small GTPases that are known to regulate macropinocytosis in non‐neuronal cells (including Rac1, Cdc42 and RhoA) leading to APP internalization by macropinocytosis. Method Neuro2a neuronal cells are transfected with fluorescent‐tagged proteins including Fe65, Rac1, Cdc42 and RhoA. Membrane PI(4,5)P2, a marker for membrane ruffling and the initiation of macropinocytosis, is visualized using fluorescent‐tagged marker known as PLCdelta‐PH. Cells are cultured in 37°C confocal dishes on the stage of a Leica SP8 confocal microscope. Fluorescent‐labelled anti‐APP antibodies are added to bind/cross‐link APP at the plasma membrane. We then use confocal microscopy/live cell imaging to visualize the recruitment of the regulatory proteins in real time. Result Upon anti‐APP antibody binding, we can see APP recruited to sites on the plasma membrane enriched with PI(4,5)P2 and the plasma membrane begins to ruffle. We see Fe65 rapidly recruited to the membrane, along with active Arf6 at these sites of membrane ruffling. We also observe Rac1, Cdc42 and RhoA recruited to these regions. APP at these sites is then observed to rapidly internalize to lysosomes, demonstrated by its colocalization with the lysosomal marker LAMP1. Conclusion These results demonstrate the active recruitment of GTPase proteins known to regulate macropinocytosis to the membrane at sites of APP binding/cross‐linking. These regulators could be targeted to modulate APP trafficking and reduce the production of Aβ.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.290
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

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