MétaCan
Menu
Back to cohort
Record W4313639212 · doi:10.2147/ndt.s376942

Glutathione S-Transferase M1/T1 Polymorphisms and Schizophrenia Risk: A New Method for Quality Assessment and a Systematic Review

2023· review· en· W4313639212 on OpenAlexaboutno aff
Hongzhou Liu, Ying Xu, Jie Peng

Bibliographic record

VenueNeuropsychiatric Disease and Treatment · 2023
Typereview
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGlutathione Transferases and Polymorphisms
Canadian institutionsnot available
FundersNatural Science Foundation of Sichuan ProvinceWuhan UniversityZhongnan Hospital of Wuhan UniversityChengdu Medical College
KeywordsMedicineGlutathione S-transferaseSchizophrenia (object-oriented programming)TransferaseGlutathioneBioinformaticsComputational biologyInternal medicinePsychiatryBiochemistryEnzyme

Abstract

fetched live from OpenAlex

Background: GST genes were reported to be involved in susceptibility to mental disorder. The results between deletions of GST genes and schizophrenia were inconclusive and confusing. Therefore, we performed this updated meta-analysis to outline the association using a new method for quality assessment. Methods: Sixteen reported studies were selected, and the overall OR and 95% CI were calculated and analyzed by Review Manager 5.4 and STATE 12. The Newcastle-Ottawa Quality Assessment Scale (NOS) for case–control studies was rewritten to evaluate the quality of published studies, as there was no “Exposure” in these studies and other factors should be suggested to assess the quality. Results: There was no significant association between deletions of GST genes and SZ risk ( p > 0.05 in Random model). We also failed to find a significant relation between null genotypes and SZ risk in East Asian population. Based on further analysis of PCR methods, GSTM1 null was weakly associated with SZ risk in 8 studies using multiplex PCR (OR = 1.17, 95% CI = 1.00– 1.37, p = 0.05), but GSTT1 null was a protective factor for SZ risk (OR = 0.73, 95% CI = 0.56– 0.94, p = 0.02). When stratified by rewritten NOS stars and deductions, GSTM1 null was significantly associated with SZ risk in 9 studies with high quality (OR = 1.24, 95% CI = 1.08– 1.43, p = 0.002), and in 10 studies with no deductions (OR = 1.20, 95% CI = 1.05– 1.38, p = 0.007). Conclusion: GSTM1 null genotype may be a genetic risk factor for SZ in studies using multiplex PCR and high-quality studies. However, GSTT1 null might be a protective factor. Besides, we provided a new method for quality assessment and it was useful and should be promoted in further analysis. Keywords: glutathione S-transferase T1 , GSTM1 , polymorphism, schizophrenia, meta-analysis

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.321
metaresearch head score (Gemma)0.558
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Evaluation · Consensus signal: none
Study designCandidate signal: Systematic review · Consensus signal: Systematic review
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.679
Threshold uncertainty score0.837

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.3210.558
Meta-epidemiology (narrow)0.0040.003
Meta-epidemiology (broad)0.0160.023
Bibliometrics0.0290.023
Science and technology studies0.0020.004
Scholarly communication0.0090.006
Open science0.0050.007
Research integrity0.0050.003
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.043
GPT teacher head0.379
Teacher spread0.336 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designSystematic review
DomainEvaluation
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2023
Admission routes1
Has abstractyes

Explore more

Same venueNeuropsychiatric Disease and TreatmentSame topicGlutathione Transferases and PolymorphismsFrench-language works237,207