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Record W4327556923 · doi:10.1038/s41467-023-37129-0

Cryptosporidium uses CSpV1 to activate host type I interferon and attenuate antiparasitic defenses

2023· article· en· W4327556923 on OpenAlexfundno aff
Silu Deng, Wei He, Ai‐Yu Gong, Min Li, Yang Wang, Zijie Xia, Xin-Tiang Zhang, Andrew Huang-Pacheco, Ankur Naqib, Mark C. Jenkins, Patrick C. Swanson, Kristen M. Drescher, Juliane K. Strauss-Soukup, Michael Belshan, Xian‐Ming Chen

Bibliographic record

VenueNature Communications · 2023
Typearticle
Languageen
FieldImmunology and Microbiology
TopicParasitic Infections and Diagnostics
Canadian institutionsnot available
FundersNational Center for Research ResourcesUniversity of California, San DiegoUniversity of North Carolina at Chapel HillNational Institutes of HealthNational Institute of Allergy and Infectious DiseasesMcMaster UniversityDivision of Intramural Research, National Institute of Allergy and Infectious Diseases
KeywordsCryptosporidium parvumInterferonCryptosporidiumBiologyAntiparasiticVirologyMicrobiologyInterferon type IRNA silencingDiarrheaImmunologyRNAMedicineRNA interferenceFecesGene

Abstract

fetched live from OpenAlex

Abstract Cryptosporidiuminfects gastrointestinal epithelium and is a leading cause of infectious diarrhea and diarrheal-related death in children worldwide. There are no vaccines and no fully effective therapy available for the infection. Type II and III interferon (IFN) responses are important determinants of susceptibility to infection but the role for type I IFN response remains obscure.Cryptosporidium parvumvirus 1 (CSpV1) is a double-stranded RNA (dsRNA) virus harbored byCryptosporidiumspp. Here we show that intestinal epithelial conditionalIfnar1−/−mice (deficient in type I IFN receptor) are resistant toC. parvuminfection. CSpV1-dsRNAs are delivered into host cells and trigger type I IFN response in infected cells. WhereasC. parvuminfection attenuates epithelial response to IFN-γ, loss of type I IFN signaling or inhibition of CSpV1-dsRNA delivery can restore IFN-γ-mediated protective response. Our findings demonstrate that type I IFN signaling in intestinal epithelial cells is detrimental to intestinal anti-C. parvumdefense andCryptosporidiumuses CSpV1 to activate type I IFN signaling to evade epithelial antiparasitic response.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.330
Teacher spread0.302 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations41
Published2023
Admission routes1
Has abstractyes

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