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Record W4376637409 · doi:10.1101/2023.05.11.23289873

Systematic review search strategies are poorly described and not reproducible: a cross-sectional meta-research study

2023· preprint· en· W4376637409 on OpenAlexaff
Melissa L. Rethlefsen, Tara Brigham, Carrie Price, David Moher, L.M. Bouter, Jamie J Kirkham, Sara Schroter, Maurice P. Zeegers

Bibliographic record

VenuemedRxiv · 2023
Typepreprint
Languageen
FieldDecision Sciences
TopicMeta-analysis and systematic reviews
Canadian institutionsOttawa Hospital
FundersUniversity of SussexUniversity of WashingtonUniversitetet i OsloUniversity of LeedsUniversity of Miami
KeywordsSystematic reviewOperationalizationDatabaseMEDLINEGuidelineInformation retrievalComputer scienceMedicinePathologyPolitical science

Abstract

fetched live from OpenAlex

ABSTRACT Objective To determine the reproducibility of biomedical systematic review search strategies. Design Cross-sectional meta-research study. Population Random sample of 100 systematic reviews indexed in MEDLINE in November 2021. Main Outcome Measures The primary outcome measure is the percentage of systematic reviews for which all database searches can be reproduced. This was operationalized as fulfilling six key PRISMA-S reporting guideline items (database name, multi-database searching, full search strategies, limits and restrictions, date(s) of searches, and total records) and having all database searches reproduced within 10% of the number of original results. Results The 100 systematic review articles contained 453 database searches. Of those, 214 (47.2%) provided complete database information (named the database and platform; PRISMA-S item 1). Only 22 (4.9%) database searches reported all six PRISMA-S items. Forty-seven (10.4%) database searches could be reproduced within 10% of the number of results from the original search; 6 searches differed by more than 1000% between the originally reported number of results and the reproduction. Only one systematic review article provided the necessary details for all database searches to be fully reproducible. Conclusion Systematic review search reporting is poor. As systematic reviews and clinical practice guidelines based upon them continue to proliferate, so does research waste. To correct this will require a multi-faceted response from systematic review authors, peer reviewers, journal editors, and database providers.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.584
metaresearch head score (Gemma)0.831
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Reproducibility · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.416
Threshold uncertainty score0.513

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.5840.831
Meta-epidemiology (narrow)0.0020.004
Meta-epidemiology (broad)0.0070.012
Bibliometrics0.0170.020
Science and technology studies0.0030.005
Scholarly communication0.0080.009
Open science0.0040.005
Research integrity0.0040.002
Insufficient payload (model declined to judge)0.0050.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.936
GPT teacher head0.637
Teacher spread0.299 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designObservational
DomainReproducibility
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2023
Admission routes1
Has abstractyes

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