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Record W4387728795 · doi:10.1176/appi.ajp.20230053

Meta-Analyses of Genome-Wide Association Studies for Postpartum Depression

2023· article· en· W4387728795 on OpenAlexfundno aff
Jerry Guintivano, Enda M. Byrne, Jacqueline Kiewa, Shuyang Yao, Anna E. Bauer, Karolina A. Åberg, Mark J. Adams, Archie Campbell, Megan L. Campbell, Karmel W. Choi, Elizabeth C. Corfield, Alexandra Havdahl, Donald Hucks, Nastassja Koen, Yi Lu, Merete Lund Mægbæk, Jimmy Mullaert, Roseann E. Peterson, Laura M. Raffield, Hannah Sallis, Julia Sealock, Alicia Walker, Hunna J. Watson, Ying Xiong, Jessica Yang, Richard Anney, Katherine Gordon‐Smith, Leon Hubbard, Lisa Jones, Raluca Mihăescu, Mette Nyegaard, Antonio F. Pardiñas, Amy Perry, Nazmus Saquib, Aladdin H. Shadyab, Alexander Viktorin, Ole A. Andreassen, Tim B. Bigdeli, Lea K. Davis, Cindy‐Lee Dennis, Arianna Di Florio, Caroline Dubertret, Yen‐Chen Anne Feng, Benício N. Frey, Sophie Grigoriadis, Emilie Gloaguen, Ian Jones, James L. Kennedy, Holly Krohn, Theodora Kunovac Kallak, Yun Li, Nicholas G. Martin, Andrew M. McIntosh, Jeannette Milgrom, Trine Munk‐Olsen, Tim F. Oberlander, Catherine M. Olsen, Nicolás Ramoz, Ted Reichborn‐Kjennerud, Emma Robertson Blackmore, David Rubinow, Alkistis Skalkidou, Jordan W. Smoller, Dan J. Stein, Zachary N. Stowe, Valerie H. Taylor, Sarah Tebeka, Martin Tesli, Ryan J. Van Lieshout, Edwin J. C. G. van den Oord, Simone N. Vigod, Thomas Werge, Lars T. Westlye, David C. Whiteman, Heather J. Zar, Naomi R. Wray, Samantha Meltzer‐Brody, Patrick Sullivan

Bibliographic record

VenueAmerican Journal of Psychiatry · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic Associations and Epidemiology
Canadian institutionsnot available
FundersNational Health and Medical Research CouncilHorizon 2020 Framework ProgrammeNorges ForskningsrådH. Lundbeck A/SNational Institute of Mental HealthVetenskapsrådetLundbeckfondenWellcome TrustNational Institutes of HealthSage TherapeuticsNational Alliance for Research on Schizophrenia and DepressionHelse Sør-Øst RHFMedical Research CouncilBiogenWomen's College HospitalEuropean CommissionBill and Melinda Gates Foundation
KeywordsDepression (economics)Genome-wide association studyPostpartum depressionAssociation (psychology)Genetic associationPsychologyPsychiatryMeta-analysisMedicineClinical psychologyGeneticsBiologyPregnancyInternal medicineSingle-nucleotide polymorphismPsychotherapistGenotypeGene

Abstract

fetched live from OpenAlex

OBJECTIVE: Postpartum depression (PPD) is a common subtype of major depressive disorder (MDD) that is more heritable, yet is understudied in psychiatric genetics. The authors conducted meta-analyses of genome-wide association studies (GWASs) to investigate the genetic architecture of PPD. METHOD: Meta-analyses were conducted on 18 cohorts of European ancestry (17,339 PPD cases and 53,426 controls), one cohort of East Asian ancestry (975 cases and 3,780 controls), and one cohort of African ancestry (456 cases and 1,255 controls), totaling 18,770 PPD cases and 58,461 controls. Post-GWAS analyses included 1) single-nucleotide polymorphism (SNP)-based heritability ([Formula: see text]), 2) genetic correlations between PPD and other phenotypes, and 3) enrichment of the PPD GWAS findings in 27 human tissues and 265 cell types from the mouse central and peripheral nervous system. RESULTS: No SNP achieved genome-wide significance in the European or the trans-ancestry meta-analyses. The [Formula: see text] of PPD was 0.14 (SE=0.02). Significant genetic correlations were estimated for PPD with MDD, bipolar disorder, anxiety disorders, posttraumatic stress disorder, insomnia, age at menarche, and polycystic ovary syndrome. Cell-type enrichment analyses implicate inhibitory neurons in the thalamus and cholinergic neurons within septal nuclei of the hypothalamus, a pattern that differs from MDD. CONCLUSIONS: While more samples are needed to reach genome-wide levels of significance, the results presented confirm PPD as a polygenic and heritable phenotype. There is also evidence that despite a high correlation with MDD, PPD may have unique genetic components. Cell enrichment results suggest GABAergic neurons, which converge on a common mechanism with the only medication approved by the U.S. Food and Drug Administration for PPD (brexanolone).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.064
Threshold uncertainty score0.318

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.071
GPT teacher head0.379
Teacher spread0.308 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations66
Published2023
Admission routes1
Has abstractyes

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