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Record W4392582100 · doi:10.1101/2024.03.06.24303776

Genome-wide association study identifies new loci associated with OCD

2024· preprint· en· W4392582100 on OpenAlexafffund
Nora I. Strom, Matthew Halvorsen, Chao Tian, Christian Rück, Gerd Kvale, Bjarne Hansen, Jonas Bybjerg‐Grauholm, Jakob Grove, Julia Boberg, Judith Becker Nissen, Thomas D. Als, Thomas Werge, Elles de Schipper, Bengt T. Fundín, Christina M. Hultman, Kira D. Höffler, Nancy L. Pedersen, Sven Sandin, Cynthia M. Bulik, Mikael Landén, Elinor K. Karlsson, Kristen Hagen, Kerstin Lindblad‐Toh, David M. Hougaard, Sandra Meier, Stéphanie Le Hellard, Ole Mors, Anders D. Børglum, Jan Haavik, David A. Hinds, David Mataix‐Cols, James J. Crowley, Manuel Mattheisen

Bibliographic record

VenuemedRxiv · 2024
Typepreprint
Languageen
FieldPsychology
TopicObsessive-Compulsive Spectrum Disorders
Canadian institutionsDalhousie University
FundersUniversity of California, Los AngelesNational Institutes of HealthInstituto Nacional de Medicina GenómicaFundació Institut de Recerca Hospital Universitari Vall d’HebronNorwegian Institute of Public HealthHaukeland UniversitetssjukehusRheinische Friedrich-Wilhelms-Universität BonnTartu ÜlikoolH. Lundbeck A/SDeutsches Zentrum für Neurodegenerative ErkrankungenUniversitetet i BergenFudan UniversityAlbert-Ludwigs-Universität FreiburgUniversity of New South WalesInstituto de Salud Carlos IIIUniversitat de BarcelonaGöteborgs UniversitetKoninklijke Nederlandse Akademie van WetenschappenRijksuniversiteit GroningenKarolinska InstitutetLundbeckfondenInstitut National de la Santé et de la Recherche MédicaleDepartment of Psychiatry, Columbia UniversityJohns Hopkins Bloomberg School of Public HealthVanderbilt UniversityUniversitetet i OsloAmsterdam University Medical CentersNorges Teknisk-Naturvitenskapelige UniversitetNational Institute of Mental HealthAarhus UniversitetBroad InstituteUniversität zu KölnDalhousie UniversityNational Health Research InstitutesVanderbilt University Medical CenterUniversity of PittsburghUniversity of SydneyJohns Hopkins UniversityUniversity of North Carolina at Chapel HillUniversiteit StellenboschHelsingin YliopistoBrown UniversityGeorg-August-Universität GöttingenAssistance publique-Hôpitaux de ParisMassachusetts General Hospital
KeywordsGenome-wide association studySingle-nucleotide polymorphismHeritabilityGenetic associationSNPBiologyGeneticsMissing heritability problemGenetic architectureGeneQuantitative trait locusGenotype

Abstract

fetched live from OpenAlex

To date, four genome-wide association studies (GWAS) of obsessive-compulsive disorder (OCD) have been published, reporting a high single-nucleotide polymorphism (SNP)-heritability of 28% but finding only one significant SNP. A substantial increase in sample size will likely lead to further identification of SNPs, genes, and biological pathways mediating the susceptibility to OCD. We conducted a GWAS meta-analysis with a 2-3-fold increase in case sample size (OCD cases: N = 37,015, controls: N = 948,616) compared to the last OCD GWAS, including six previously published cohorts (OCGAS, IOCDF-GC, IOCDF-GC-trio, NORDiC-nor, NORDiC-swe, and iPSYCH) and unpublished self-report data from 23andMe Inc. We explored the genetic architecture of OCD by conducting gene-based tests, tissue and celltype enrichment analyses, and estimating heritability and genetic correlations with 74 phenotypes. To examine a potential heterogeneity in our data, we conducted multivariable GWASs with MTAG. We found support for 15 independent genome-wide significant loci (14 new) and 79 protein-coding genes. Tissue enrichment analyses implicate multiple cortical regions, the amygdala, and hypothalamus, while cell type analyses yielded 12 cell types linked to OCD (all neurons). The SNP-based heritability of OCD was estimated to be 0.08. Using MTAG we found evidence for specific genetic underpinnings characteristic of different cohort-ascertainment and identified additional significant SNPs. OCD was genetically correlated with 40 disorders or traits-positively with all psychiatric disorders and negatively with BMI, age at first birth and multiple autoimmune diseases. The GWAS meta-analysis identified several biologically informative genes as important contributors to the aetiology of OCD. Overall, we have begun laying the groundwork through which the biology of OCD will be understood and described.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.061
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0020.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.294
Teacher spread0.276 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations8
Published2024
Admission routes2
Has abstractyes

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