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Record W4396992736 · doi:10.1681/asn.20213210s1745a

Apabetalone Downregulates Fibrotic, Inflammatory and Calcific Processes in Renal Mesangial Cells: Mechanism for Reduced Cardiac Events in CKD Patients

2021· article· en· W4396992736 on OpenAlexaff
Dean Gilham, Li Fu, Brooke D. Rakai, Sylwia Wasiak, Laura Tsujikawa, Chris Sarsons, Stephanie C. Stotz, Jan O. Johansson, Michael Sweeney, Norman C.W. Wong, Kamyar Kalantar‐Zadeh, Ewelina Kulikowski

Bibliographic record

VenueJournal of the American Society of Nephrology · 2021
Typearticle
Languageen
FieldMedicine
TopicPotassium and Related Disorders
Canadian institutionsResverlogix (Canada)
Fundersnot available
KeywordsMechanism (biology)MedicineInflammationInternal medicine

Abstract

fetched live from OpenAlex

Background: Major adverse cardiac events (MACE) are prevalent in patients with chronic kidney disease (CKD). Apabetalone inhibits BET proteins, which regulate expression of genes involved in fibrosis, inflammation & calcification. In the phase 3 BETonMACE trial, apabetalone reduced MACE in patients with CKD (eGFR<60) implying favorable effects on the kidney-heart axis. Here we examine apabetalone's impact on pathways of nephropathy in human renal mesangial cells (HRMCs). Methods: HRMCs were stimulated with TGF-β1 or LPS ± 1-25μM apabetalone. Gene expression was measured by real-time PCR & RNA-seq. Smooth muscle actin (a-SMA) was examined by immunofluorescence & alkaline phosphatase (TNALP) activity in biochemical assays. RNA-seq from TGF-β1 stimulated HRMC was evaluated by GO and Ingenuity Pathway Analysis (IPA). Results: In HRMCs, apabetalone suppressed TGF-b1 induced pro-fibrotic gene expression including (a) a-SMA, a fibrotic marker, by 90% p<0.001 & de novo a-SMA protein production (b) fibronectin, an extracellular matrix (ECM) component, by 44% p<0.001 (c) NOX4, promoting reactive oxygen species (ROS) production, by 82% p<0.001 (d) TNALP, promoting calcification, by 96% & TNALP activity by 96% p<0.001. Apabetalone opposed LPS induced inflammatory gene expression: IL6 by 94%, IL1B by 95% & PTGS2 (COX2) by 94% p<0.001. In GO, ECM gene sets were in the top 20 affected by apabetalone, indicating reduced fibrosis. IPA predicted inhibition of NfkB-RelA and NFkB complex to suppress inflammation, and activation of glucose utilization & tolerance of ROS production pathways, such as Oxidative Phosphorylation (z-score 5.7 p<0.01 at 25μM; z-score 3.5 p>0.05 at 5μM) and NRF2-Mediated Oxidative Stress Response (z score 2.3 p<0.001 at 25μM; z-score 1.6 p<0.001 at 5μM). Conclusions: Apabetalone downregulates responses to TGF-β1 or LPS that promote fibrosis, inflammation & calcification in HRMCs. Changes in energy metabolism pathways predict apabetalone enables HRMC to cope with elevated glucose. Our results provide mechanistic insight into reduced MACE in CKD patients receiving apabetalone in the BETonMACE trial, & predict efficacy in the upcoming phase 3 BETonMACE2 trial. Funding: Commercial Support - Resverlogix Corp.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.241
Teacher spread0.234 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2021
Admission routes1
Has abstractyes

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