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Record W4397022047 · doi:10.1093/aje/kwae071

Validation of algorithms in studies based on routinely collected health data: general principles

2024· article· en· W4397022047 on OpenAlexaff
Véra Ehrenstein, Maja Hellfritzsch, Johnny Kahlert, Sinéad Langan, Hisashi Urushihara, Danica Marinac‐Dabic, Jennifer L. Lund, Henrik Toft Sørensen, Eric I. Benchimol

Bibliographic record

VenueAmerican Journal of Epidemiology · 2024
Typearticle
Languageen
FieldMathematics
TopicAdvanced Causal Inference Techniques
Canadian institutionsInstitute for Clinical Evaluative SciencesSickKids FoundationUniversity of Toronto
FundersGaldermaNational Institutes of HealthAarhus UniversitetRegion MidtjyllandSanofi
KeywordsComputer scienceOperationalizationExternal validityData miningTerminologyAlgorithmContext (archaeology)CovariateData scienceManagement scienceMachine learningStatisticsMathematics

Abstract

fetched live from OpenAlex

Clinicians, researchers, regulators, and other decision-makers increasingly rely on evidence from real-world data (RWD), including data routinely accumulating in health and administrative databases. RWD studies often rely on algorithms to operationalize variable definitions. An algorithm is a combination of codes or concepts used to identify persons with a specific health condition or characteristic. Establishing the validity of algorithms is a prerequisite for generating valid study findings that can ultimately inform evidence-based health care. In this paper, we aim to systematize terminology, methods, and practical considerations relevant to the conduct of validation studies of RWD-based algorithms. We discuss measures of algorithm accuracy, gold/reference standards, study size, prioritization of accuracy measures, algorithm portability, and implications for interpretation. Information bias is common in epidemiologic studies, underscoring the importance of transparency in decisions regarding choice and prioritizing measures of algorithm validity. The validity of an algorithm should be judged in the context of a data source, and one size does not fit all. Prioritizing validity measures within a given data source depends on the role of a given variable in the analysis (eligibility criterion, exposure, outcome, or covariate). Validation work should be part of routine maintenance of RWD sources. This article is part of a Special Collection on Pharmacoepidemiology.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.749
metaresearch head score (Gemma)0.856
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: Methods
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.251
Threshold uncertainty score0.310

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.7490.856
Meta-epidemiology (narrow)0.0040.005
Meta-epidemiology (broad)0.0080.009
Bibliometrics0.0150.011
Science and technology studies0.0050.033
Scholarly communication0.0210.016
Open science0.0130.018
Research integrity0.0120.014
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.481
GPT teacher head0.545
Teacher spread0.064 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designTheoretical or conceptual
DomainMethods
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations39
Published2024
Admission routes1
Has abstractyes

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