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Record W4402454018 · doi:10.1101/2024.09.10.24313417

External Control Arm with Synthetic Real-world Data for Comparative Oncology using Single Trial Arm Evidence (ECLIPSE): A Case Study using Lung-MAP S1400I

2024· preprint· en· W4402454018 on OpenAlexaffabout
Alind Gupta, Luke Segars, David Allen Singletary, Johan Liseth Hansen, Kirk Geale, Anmol Arora, Manuel Gomes, Sreeram V Ramagopalan, Winson Y. Cheung, Paul Arora

Bibliographic record

VenuemedRxiv · 2024
Typepreprint
Languageen
FieldMedicine
TopicRadiomics and Machine Learning in Medical Imaging
Canadian institutionsUniversity of CalgaryPublic Health OntarioUniversity of TorontoHealth Canada
Fundersnot available
KeywordsEclipseReal world dataReal world evidenceMedicineControl (management)OncologyComputer scienceInternal medicineArtificial intelligenceData science

Abstract

fetched live from OpenAlex

2. Abstract Single-arm trials supplemented with external comparator arm(s) (ECA) derived from real-world data are sometimes used when randomized trials are infeasible. However, due to data sharing restrictions, privacy/security concerns, or for logistical reasons, patient-level real-world data may not be available to researchers for analysis. Instead, it may be possible to use generative models to construct synthetic data from the real-world dataset that can then be freely shared with researchers. Although the use of generative models and synthetic data is gaining prominence, the extent to which a synthetic data ECA can replace original data while preserving patient privacy in small samples is unclear. Objective To compare the efficacy of nivolumab + ipilimumab combination therapy (“experimental arm”) versus nivolumab monotherapy (“control arm”) in patients with metastatic non-small cell lung cancer (mNSCLC) using real-world data from two real-world databases (“original ECA”), and synthetic data versions of these datasets (“synthetic ECA”), with the aim of validating synthetic data for use in ECA analysis. Study design Non-randomized analyses of treatment efficacy comparing the experimental arm to the (i) original ECA and (ii) synthetic ECA, with baseline confounding adjustment. Data sources The experimental arm is from the Lung-MAP no-match substudy S1400I ( NCT02785952 ) provided by National Clinical Trials Network (NCTN) in the United States. The real-world data source for the ECA is data from population-based oncology data from the Canadian province of Alberta, and from Nordic countries in Europe, specifically Denmark and Norway.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.223
metaresearch head score (Gemma)0.449
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.777
Threshold uncertainty score0.959

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.2230.449
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.008
Bibliometrics0.0020.004
Science and technology studies0.0010.002
Scholarly communication0.0040.003
Open science0.0030.003
Research integrity0.0050.003
Insufficient payload (model declined to judge)0.0130.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.208
GPT teacher head0.464
Teacher spread0.256 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designSimulation or modeling
DomainMethods
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes2
Has abstractyes

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