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Record W4402717585 · doi:10.1016/j.jaci.2026.04.032

BCR ligation selectively inhibits IgE class switch recombination

2024· preprint· en· W4402717585 on OpenAlexfundno aff
Adam K. Wade‐Vallance, Zhiyong Yang, Jeremy B. Libang, Ananya R. Krishnapura, James Jung, Emily Matcham, Marcus J Robinson, Christopher D.C. Allen

Bibliographic record

VenueJournal of Allergy and Clinical Immunology · 2024
Typepreprint
Languageen
FieldImmunology and Microbiology
TopicT-cell and B-cell Immunology
Canadian institutionsnot available
FundersNational Institute of Allergy and Infectious DiseasesCanadian Institutes of Health ResearchUniversity of California, San FranciscoNational Institutes of HealthPew Charitable Trusts
Keywordsbreakpoint cluster regionLigationImmunoglobulin class switchingRecombinationImmunoglobulin EClass (philosophy)ChemistryBiologyGeneticsMolecular biologyComputer scienceAntibodyB cellReceptorGene

Abstract

fetched live from OpenAlex

BACKGROUND: Mechanisms that restrict class switch recombination (CSR) to IgE may limit the subsequent production of IgE antibodies in allergic diseases. A role for B-cell receptor (BCR) signaling in IgE regulation was revealed in mice and in cultured B cells with altered BCR signaling. While prior work has focused on BCR signaling in IgE-switched cells, BCR signaling also reportedly inhibits CSR. OBJECTIVE: We sought to determine whether BCR signaling selectively inhibits IgE CSR. METHODS: We assessed whether BCR signaling strength affected IgE responses in immunized mice. For mechanistic evaluation, primary mouse or human B cells were induced to switch to IgE in cell culture and were perturbed with antibodies or cognate antigen to ligate the BCR, pharmacologic inhibitors of signaling proteins, and/or additional cytokines. Primary readouts were flow cytometry and RNA analysis. RESULTS: In immunized mice, BCR signaling strength inversely correlated with the relative frequencies of IgE-switched germinal center B cells and plasma cells. In mouse B-cell cultures, BCR signaling selectively inhibited IgE CSR in a manner dependent on ligand concentration, affinity, and avidity. This inhibition required Syk, whereas blockade of the PI3K subunit p110δ increased IgE cell frequencies independently of BCR ligation. The cytokines IL-21 or TGF-β1, in combination with BCR ligation, cooperatively inhibited IgE CSR. Similar results were observed in cultures of human tonsillar B cells. CONCLUSION: IgE CSR is uniquely susceptible to inhibition by BCR signaling in mouse and human B cells, with important implications for the regulation and pathogenesis of allergic disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.018

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0050.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.297
Teacher spread0.273 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractno

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