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Record W4403452644 · doi:10.1038/s41598-024-72968-x

Bridging big data in the ENIGMA consortium to combine non-equivalent cognitive measures

2024· article· en· W4403452644 on OpenAlexaff
Eamonn Kennedy, Shashank Vadlamani, Hannah M. Lindsey, Pui‐Wa Lei, Mary Jo Pugh, Paul M. Thompson, David F. Tate, Frank G. Hillary, Emily L. Dennis, Elisabeth A. Wilde, Maheen M. Adamson, Martin Alda, Sílvia Alonso-Lana, Sonia Ambrogi, Tim Anderson, Celso Arango, Robert F. Asarnow, Mihai Avram, Rosa Ayesa‐Arriola, Talin Babikian, Nerisa Banaj, Laura Bird, Stefan Borgwardt, Amy Brodtmann, Katharina Brosch, Karen Caeyenberghs, Vince D. Calhoun, Nancy D. Chiaravalloti, David X. Cifu, Benedicto Crespo‐Facorro, John C. Dalrymple‐Alford, Kristen Dams-O’Connor, Udo Dannlowski, David Darby, Nicholas D. Davenport, John DeLuca, Covadonga M. Díaz‐Caneja, Seth G. Disner, Ekaterina Dobryakova, Stefan Ehrlich, Carrie Esopenko, Fabio Ferrarelli, Lea E. Frank, Carol E. Franz, Paola Fuentes‐Claramonte, Helen M. Genova, Christopher C. Giza, Janik Goltermann, Dominik Grotegerd, Marius Gruber, Alfonso Gutiérrez‐Zotes, Minji Ha, Jan Haavik, Charles H. Hinkin, Kristen R. Hoskinson, Daniela Hubl, Andrei Irimia, Andreas Jansen, Michael Kaess, Xiaojian Kang, Kimbra Kenney, Barbora Keřková, Mohamed Salah Khlif, Minah Kim, Jochen Kindler, Tilo Kircher, Karolína Knížková, Knut K. Kolskår, Denise Krch, William S. Kremen, Taylor Kuhn, Veena Kumari, Jun Soo Kwon, Sarah Laskowitz, Jungha Lee, Jean Lengenfelder, Spencer W. Liebel, Victoria Liou‐Johnson, Sara M. Lippa, Marianne Løvstad, Astri J. Lundervold, Cassandra Marotta, Craig A. Marquardt, Paulo Mattos, Ahmad Mayeli, Carrie R. McDonald, Susanne Meinert, Tracy R. Melzer, Jessica Merchán‐Naranjo, Chantal Michel, Rajendra A. Morey, Benson Mwangi, Daniel J. Myall, Igor Nenadić, Mary R. Newsome, Abraham Nunes, Terence J. O’Brien, Viola Oertel, John Ollinger, Alexander Olsen, Víctor Ortiz‐García de la Foz, Mustafa Ozmen, Heath Pardoe, Marise B. Parent, Fabrizio Piras, Federica Piras, Edith Pomarol‐Clotet, Jonathan Repple, Geneviève Richard, Jonathan Rodríguez, Mabel Rodríguez, Kelly Rootes-Murdy, Jared A. Rowland, Nicholas P. Ryan, Raymond Salvador, Anne‐Marthe Sanders, André Schmidt, Jair C. Soares, Gianfranco Spalleta, Filip Španiel, Alena Stasenko, Frederike Stein, Benjamin Straube, April D. Thames, Florian Thomas‐Odenthal, Sophia I. Thomopoulos, Erin B. Tone, Ivan J. Torres, Maya Troyanskaya, Jessica A. Turner, Kristine M. Ulrichsen, Guillermo E. Umpierrez, Elisabet Vilella, Lucy Vivash, William C. Walker, Emilio Werden, Lars T. Westlye, Krista Wild, Adrian Wroblewski, Mon‐Ju Wu, Glenn R. Wylie, Lakshmi N. Yatham, Giovana Zunta‐Soares

Bibliographic record

VenueScientific Reports · 2024
Typearticle
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsBC Mental Health & Substance Use ServicesUniversity of British ColumbiaDalhousie University
FundersEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentNational Center for Advancing Translational SciencesNational Institute of Biomedical Imaging and BioengineeringNational Center for Research ResourcesNational Institute of Neurological Disorders and StrokeNational Institute of General Medical SciencesNational Institute of Mental HealthNational Institute on AgingNational Institutes of HealthZonMwU.S. Department of Veterans Affairs
KeywordsBridging (networking)CognitionComputer scienceBig dataData scienceData miningPsychologyNeuroscience

Abstract

fetched live from OpenAlex

Investigators in neuroscience have turned to Big Data to address replication and reliability issues by increasing sample size. These efforts unveil new questions about how to integrate data across distinct sources and instruments. The goal of this study was to link scores across common auditory verbal learning tasks (AVLTs). This international secondary analysis aggregated multisite raw data for AVLTs across 53 studies totaling 10,505 individuals. Using the ComBat-GAM algorithm, we isolated and removed the component of memory scores associated with site effects while preserving instrumental effects. After adjustment, a continuous item response theory model used multiple memory items of varying difficulty to estimate each individual's latent verbal learning ability on a single scale. Equivalent raw scores across AVLTs were then found by linking individuals through the ability scale. Harmonization reduced total cross-site score variance by 37% while preserving meaningful memory effects. Age had the largest impact on scores overall (- 11.4%), while race/ethnicity variable was not significant (p > 0.05). The resulting tools were validated on dually administered tests. The conversion tool is available online so researchers and clinicians can convert memory scores across instruments. This work demonstrates that global harmonization initiatives can address reproducibility challenges across the behavioral sciences.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.217
metaresearch head score (Gemma)0.382
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.217
Threshold uncertainty score0.966

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.2170.382
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.004
Bibliometrics0.0120.017
Science and technology studies0.0020.004
Scholarly communication0.0110.007
Open science0.0040.022
Research integrity0.0020.005
Insufficient payload (model declined to judge)0.0070.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.136
GPT teacher head0.327
Teacher spread0.190 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2024
Admission routes1
Has abstractyes

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Same venueScientific Reports→Same topicFunctional Brain Connectivity Studies→French-language works237,207→