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Record W4403831790 · doi:10.1681/asn.2024fmp001zx

GIT2 Maintains Podocyte Architecture through Suppressing Rac1 Activity and Focal Adhesion Turnover

2024· article· en· W4403831790 on OpenAlexaff
Naoyuki Shimada, Jun Matsuda, Maho Tokuchi, Kana Asano-Matsuda, Tomoko Takano, Yoshitaka Isaka

Bibliographic record

VenueJournal of the American Society of Nephrology · 2024
Typearticle
Languageen
FieldMedicine
TopicRenal Diseases and Glomerulopathies
Canadian institutionsMcGill University Health Centre
Fundersnot available
KeywordsPodocyteRAC1Cell biologyArchitectureFocal adhesionBiologyChemistryNeuroscienceKidneyEndocrinologySignal transductionProteinuriaHistory

Abstract

fetched live from OpenAlex

Background: Podocyte foot processes are supported by the actin cytoskeleton which is precisely organized by Rho GTPases including Rac1. Overactivation of Rac1 in podocytes causes structural changes in foot processes and proteinuria. To elucidate the regulatory mechanism of Rac1, we performed proximity-based ligation assay and identified GIT2 as a Rac1-interacting protein in immortalized human podocytes (HP). Methods: Subcellular localization of endogenous GIT2 in HP was examined by immunocytochemistry. HP with GIT2 knockdown (KD), GIT2 overexpression (OE) and control (CTRL) cells were established using lentiviral transduction. Rac1 activity was assessed by pull-down assay. Cell areas were quantified in fixed cells stained by phalloidin. Focal adhesion dynamics were analyzed using time-lapse fluorescence microscopy in cells transfected with mRFP-paxillin. Subcellular localization of the tyrosine phosphatase, PTP1B, was monitored using time-lapse fluorescence microscopy. Results: GIT2 localized with paxillin in focal adhesions. GTP-bound (active) Rac1 levels were significantly higher in GIT2 KD HP than in CTRL. GIT2 KD elicited cell spreading with marked lamellipodial protrusions, which was significantly attenuated by the Rac1 inhibitor NSC23766. GIT2 KD HP had smaller focal adhesions than CTRL. Focal adhesion disassembly rate was significantly higher in GIT2 KD HP, resulting in shorter focal adhesion lifetime. Among the major focal adhesion proteins, tyrosine phosphorylation of p130Cas protein was most prominently increased in GIT2 KD HP, as compared with CTRL. PTP1B localization to focal adhesions was impaired in GIT2 KD HP. The phenotypes observed in GIT2 KD HP shown above were reversed by GIT2 OE. Conclusion: We demonstrated that GIT2 suppresses Rac1 activity in focal adhesions and contributes to maintaining podocyte morphology and function. Furthermore, we showed that GIT2 facilitates translocation of the PTP1B to focal adhesions where it dephosphorylates p130Cas, thereby suppressing local Rac1 activity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.294
Teacher spread0.280 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

Explore more

Same venueJournal of the American Society of Nephrology→Same topicRenal Diseases and Glomerulopathies→French-language works237,207→