MétaCan
Menu
Back to cohort

Developing a prototype for federated analysis to enhance privacy and enable trustworthy access to COVID-19 research data

2024· article· en· W4404565156 on OpenAlexaff
Solmaz Eradat Oskoui, Matthew Retford, Eoghan Forde, Rodrigo Barnes, Karen J. Hunter, Anne Wozencraft, Simon Thompson, Chris Orton, David Ford, Sharon Heys, Julie Kennedy, Cynthia McNerney, Jeffrey Peng, Hamed Ghanbariadolat, Sarah Rees, Rachel Mulholland, Aziz Sheikh, David Burgner, Meredith Brockway, Meghan B. Azad, Natalie Rodriguez, Helga Zoëga, Sarah J. Stock, Clara Calvert, Jessica E. Miller, Nicole Fiorentino, Amy Racine, Jonas Häggström, Neil Postlethwaite

Bibliographic record

VenueInternational Journal of Medical Informatics · 2024
Typearticle
Languageen
FieldComputer Science
TopicPrivacy-Preserving Technologies in Data
Canadian institutionsUniversity of ManitobaChildren's Hospital Research Institute of ManitobaAlberta Children's Hospital
FundersMedical Research CouncilMinderoo FoundationUniversity of New South WalesSwansea UniversityWellcome TrustBill and Melinda Gates Foundation
KeywordsTrustworthinessComputer scienceInternet privacyCoronavirus disease 2019 (COVID-19)Information privacyComputer securityWorld Wide WebData scienceMedicine

Abstract

fetched live from OpenAlex

BACKGROUND: The use of federated networks can reduce the risk of disclosure for sensitive datasets by removing the requirement to physically transfer data. Federated networks support federated analytics, a type of privacy-enhancing technology, enabling trustworthy data analysis without the movement of source data. OBJECTIVES: To set out the methodology used by the International COVID-19 Data Alliance (ICODA) and its partners, the Secure Anonymised Information Linkage (SAIL) Databank and Aridhia Informatics in piloting a federated network infrastructure and consequently testing federated analytics using test data provided from an ICODA project, the International Perinatal Outcome in the Pandemic (iPOP) Study. To share the challenges and benefits of using a federated network infrastructure to enable trustworthy analysis of health-related data from multiple countries and sources. RESULTS: This project successfully developed a federated network between the SAIL Databank and the ICODA Workbench and piloted the use of federated analysis using aggregate-level model outputs as test data from the iPOP Study, a one-year, multi-country COVID-19 research project. This integration is a first step in implementing the necessary technical, governance and user experiences for future research studies to build upon, including those using individual-level datasets from multiple data nodes. CONCLUSIONS: Creating federated networks requires extensive investment from a data governance, technology, training, resources, timing and funding perspective. For future initiatives, the establishment of a federated network should be built into medium to long term plans to provide researchers with a secure and robust data analysis platform to perform joint multi-site collaboration. Federated networks can unlock the enormous potential of national and international health datasets through enabling collaborative research that addresses critical public health challenges, whilst maintaining privacy and trustworthiness by preventing direct access to the source data.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.102
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Scholarly communication, Open science
Consensus categoriesOpen science
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.726
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0070.102
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.002
Science and technology studies0.0000.000
Scholarly communication0.0020.003
Open science0.0390.065
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.232
GPT teacher head0.523
Teacher spread0.291 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2024
Admission routes1
Has abstractyes

Explore more

Same venueInternational Journal of Medical InformaticsSame topicPrivacy-Preserving Technologies in DataFrench-language works237,207