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Record W4404731945 · doi:10.1101/2024.11.25.24317882

Variable selection for competing risk regression models: recommendations for analyzing data from epidemiological studies

2024· preprint· en· W4404731945 on OpenAlexaff
Jimmy Mullaert, Sandra Schmeller, Peter C. Austin, Aurélien Latouche

Bibliographic record

VenuemedRxiv · 2024
Typepreprint
Languageen
FieldMathematics
TopicStatistical Methods and Inference
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsEpidemiologyRegression analysisSelection (genetic algorithm)Computer scienceModel selectionRegressionVariable (mathematics)EconometricsData scienceStatisticsMedicineArtificial intelligenceMathematicsMachine learning

Abstract

fetched live from OpenAlex

Abstract When fitting competing risks regression models, a variety of variable selection methods exist, including backward selection on the subdistribution hazard, on the cause-specific hazards, and penalized methods. However, a benchmark study comparing these different procedures is lacking. We conducted an extensive simulation study to compare three variable selection procedures in terms of both model selection ability and predictive accuracy. 5120 datasets were simulated in various conditions aiming at being representative of real applications in clinical epidemiology. Results show that the performance of backward selection procedure can be affected by implementation choices. Even for scenarios with a high numbers of events per variable (EPV), the true model is rarely identified by any of the selection procedures. Survival predictions were assessed with time-dependent AUC and show similar performances for all methods. We also provided an application on stem cell transplanted patients in hematology. We concluded that the identification of the true model in competing risk regression is a very difficult task, and suggest some recommendations to analysts: (1) to report event per variable for the event type of interest and (2) to use multiple methods to deal with model uncertainty and avoid implementation pitfalls.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.006
metaresearch head score (Gemma)0.057
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.445
Threshold uncertainty score0.951

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0060.057
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.002
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.587
GPT teacher head0.524
Teacher spread0.063 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designTheoretical or conceptual
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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