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Record W4405573003 · doi:10.1038/s41525-024-00451-7

Implementing genomic newborn screening as an effective public health intervention: sidestepping the hype and criticism

2024· article· en· W4405573003 on OpenAlexaff
Jan M. Friedman

Bibliographic record

Venuenpj Genomic Medicine · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomics and Rare Diseases
Canadian institutionsUniversity of British ColumbiaUniversity of British Columbia Hospital
Fundersnot available
KeywordsNewborn screeningIntervention (counseling)Public healthCriticismGenomic sequencingGenomeDNA sequencingMedicineInternet privacyGeneticsBiologyPolitical scienceComputer scienceDNAGeneLawNursing

Abstract

fetched live from OpenAlex

The development and implementation of population-based newborn screening was one of the most successful public health interventions of the twentieth century. Newborn screening is now routinely provided to almost all infants in many jurisdictions and usually includes a number of Mendelian diseases as well as some other treatable conditions of infancy. Genome-wide sequencing of the DNA that can be obtained from a small drop of an infant’s blood would permit the identification of genomic variants that are predictive of thousands of additional genetic diseases and provide the opportunity to treat many more healthy-appearing babies with childhood-onset disorders. Newborn genomic sequencing could also give parents information about genetic variants associated with conditions for which there is currently no treatment, that do not have onset until much later in life, or that only raise concern in relatives of the infant. However, our knowledge of the penetrance, natural history, and variability of most rare genetic diseases is limited, the clinical validity and utility of genomic diagnosis for many of these conditions have not yet been established, and the value of presymptomatic treatment is often unclear. As a consequence, much of the information obtained through newborn genomic screening may be of no benefit to, or could even harm, a baby. Genomic sequencing data might be stored indefinitely in an infant’s electronic health record, a prospect that raises serious ethical, legal, privacy, and social concerns. Implementing universal genomic newborn screening in accordance with widely-accepted public health disease screening criteria would sidestep most the concerns that have been raised.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.909
Threshold uncertainty score0.616

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.328
Teacher spread0.304 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations15
Published2024
Admission routes1
Has abstractyes

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