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Record W4405637695 · doi:10.1101/2024.12.19.629326

The inhibitory effects of Remodelin on myoblasts differentiation

2024· preprint· en· W4405637695 on OpenAlexaff
Veronica Sian, Andreas Hentschel, Jaakko Sarparanta, Andreas Roos, Per Harald Jonson, Swethaa Natraj Gayathri, Antonello Mai, Dante Rotili, Lucia Altucci, Bjarne Udd, Marco Savarese, Angela Nebbioso

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2024
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicNuclear Structure and Function
Canadian institutionsChildren's Hospital of Eastern Ontario
FundersDeutsche Gesellschaft für MuskelkrankeSigrid Juséliuksen SäätiöHelsinki Institute of Life Science, Helsingin YliopistoMinisterium für Kultur und Wissenschaft des Landes Nordrhein-WestfalenSamfundet FolkhälsanHelsingin Yliopisto
KeywordsMyogenesisC2C12Cell biologyMyocyteBiologyCellular differentiationMYF5LaminMyoDTranscriptomeSarcomereMyosinMolecular biologyGene expressionGeneticsGeneNucleus

Abstract

fetched live from OpenAlex

Summary Myoblasts differentiation is a highly regulated and complex process leading to the formation of fused and aligned mature myotubes. Growing interest in the role of epigenetics in muscle differentiation has highlighted epi-modulators as crucial regulators of this process. Our in vitro study aimed to explore the potential effects of the inhibition of the acetyltransferase Nat10 on myoblasts differentiation, by using Remodelin, a Nat10 selective inhibitor. We cultivated and differentiated murine C2C12 myoblasts on ultra-compliant gelatin substrates for up to 16 days and treated them with Remodelin. A combination of morphological analyses, confocal microscopy, transcriptomic profiling (RNA-seq), quantitative proteomics and metabolomics analyses was employed to assess the impact of Nat10 inhibition on myotube formation and maturation. To evaluate the reproducibility of Remodelin effects across myogenic systems and species, L6 rat myoblasts were included as a secondary comparative model. Remodelin treatment impaired myotube organization, alignment, and structural maturation in both C2C12 and L6 cells compared to untreated controls. In C2C12 cultures, Remodelin also abolished spontaneous myotube contractility. Intersection of transcriptomics and proteomics analyses confirmed that Remodelin effectively slowed myotube formation. Overall, these results indicate that Remodelin broadly affects the regulatory networks involved in skeletal muscle differentiation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.016
Threshold uncertainty score0.978

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.192
Teacher spread0.187 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes1
Has abstractyes

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