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Record W4409626698 · doi:10.1158/1538-7445.am2025-4153

Abstract 4153: Biomarker-driven polyamine pathway targeting as a treatment approach for TNBC

2025· article· en· W4409626698 on OpenAlexaff
Thomas J. Velenosi

Bibliographic record

VenueCancer Research · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer, Hypoxia, and Metabolism
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsPolyamineBiomarkerCancer researchMedicineComputational biologyBiologyBiochemistry

Abstract

fetched live from OpenAlex

Abstract Triple negative breast cancer accounts for about 15% of all breast cancer diagnoses and represents the most aggressive breast cancer subtype. This study aims to use a polyamine biomarker-driven approach to treat TNBC. Polyamines are small cationic molecules important for cancer cell growth and spermidine/spermine N1-acetlytransferase (SAT1) is the rate-limiting catabolic enzyme in the pathway. Our previous work demonstrated that doxorubicin induces SAT1 expression in moderate-SAT1 expressing TNBC models. We hypothesize that the effectiveness of using an SAT1 agonist to treat TNBC is dependent on baseline SAT1 expression and function. TNBC cell lines and patient-derived xenografts with low, moderate, and high baseline expression levels of SAT1 were used to evaluate the hypothesis. Cell lines were treated with TNBC standard-of-care doxorubicin, the SAT1 agonist N1, N11-diethylnorspermine (DENSpm), combination DENSpm-doxorubicin, or vehicle control. Adding DENSpm to sub-therapeutic doxorubicin treatments further decreased cell viability in moderate and high baseline SAT1 expressing cells (p<0.05). DENSpm depleted spermidine in moderate-SAT1 expressing TNBC-PDX ex vivo tumours slices, which was further depleted by combining with doxorubicin. In vivo, the addition of DENSpm to doxorubicin treatment further attenuated tumour growth in moderate-SAT1 expression TNBC-PDX, which corresponded to an increase in urine diacetylspermine as an indicator of treatment effectiveness. In conclusion, the results of this study suggest that combination doxorubicin and DENSpm treatment may be an effective treatment option for TNBC tumours with moderate baseline SAT1 expression, and that urine diacetylspermine production may be indicative of treatment effectiveness. Citation Format: Chloe White, Caroline Liang, Thomas Velenosi. Biomarker-driven polyamine pathway targeting as a treatment approach for TNBC [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2025; Part 1 (Regular Abstracts); 2025 Apr 25-30; Chicago, IL. Philadelphia (PA): AACR; Cancer Res 2025;85(8_Suppl_1):Abstract nr 4153.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.062
GPT teacher head0.393
Teacher spread0.331 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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